| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0350 |
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| Symbol | |
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| ID | 8131264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 405999 |
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| End bp | 407534 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644863630 |
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| Product | porin LamB type |
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| Protein accession | YP_003015945 |
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| Protein GI | 253686755 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4580] Maltoporin (phage lambda and maltose receptor) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.672249 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCAA GCCACCTTGC TGTGACGATA GGATTATTAC TCTCCTCCCC GTTTTATGTT
TCTGCTGCCA ACACCGATAG TATTGAAGCT CGCCTGAACG CCATGGAGCA ACGCCTGCAA
CAGGCGGAAG CCCGTGCTCA GGCCGCGGAA GCCAGAGCCG ACGCCGCGGA AAAGCAAACC
CAACAGCTCG CCACTCGCAC GACACAAACC GAACAGAAAA CCCAGCAGGT GGAGCAGCGC
ACGACGGCGC TGGCTAAGCA AAAATCATTC GCCGATGGAT TTGAATTCCA CGGCTACGCG
CGTTCCGGCC TGTCGATCAA TGATTCCGCC ACCAGTTCCA AAACCGATAT CGGGCCGGGC
ATGTCCCCTG CGGGTCAGAC TGGCGGACAT ATTGGTCGTT TAGGCAATGA AGACGACACC
TACGTCGAGA TCAAACTGGA ACACAAACAG AAGCTGGATA ACGGTGCGAC CACTCGCTTC
AAGGTGATGA TGGCGGATGG CCAGCGCAGC TATAACGACT GGACGGCAAC CACCAGCGAC
CTGAATATCC GCGAAGCCTT CGTCGAGCTG GGTTCATTAC CGACCTTCAC TGGTGCCTTT
AAGGACACCA CGCTGTGGGC GGGTAAACGC TTCGATCGCG ATAACTTCGA TATCCACTGG
CTGGACAGCG ATGTGGTCTT CCTCGCAGGC ACCGGCGGCG GGATCTATGA CGTGAAATGG
GCGGATAGCG CCAAGAGTAA CTTCTCGCTG TATGGCCGCA GCCTCGGCGA AATTACCTCG
CTGGATAACG ACATCAAAAA CTACGTCTTT ACCGCCAACA ACTACGTTGG GCCATTCCAG
TTCATGCTGA GCGGATTAAC CGCCAAGAAC AACGATGTAA AACAAAATAC CGGTACAAGC
CGCGATAACA CCTTCGTTAC CAATACCAAT GCGGGCGACA AAGGCTATCA CGCCATGGTG
GCTTACCACG GCGACAGCTT CTACGGCTTA CGCGACGGGA CATCAAAAAC CGCGATCCTC
TACGGTCACG GACTGGGCGG CGAAGTGAAG AACATCGGTG CCGACGGCAA CCTGACCAAC
GACGCCAACA CCTGGCGATT TGCGACTTAC GGTACGACTG CGTTGAACAA AACCTGGAGC
TTTGCTCCAT CCATTCTGGC GCAAACCAGT AAAGACCGTT ACGTCAACGG CGATAGCTAC
GAATGGGTGA CGTTTAATGC GCGCCTGATT CAGGAAATCA CCGAAAACTT TGCACTGGCC
TATGAAGGCA GCTATCAATA CATGGACCTC GATCCGCGCG GCTATCGCAG CCTGAATCAG
GTGAGCGGCG GCTTCTACAA ATTGACCTTC GCACCGACGT TCAAGGTTGG CGATATCGGT
AACTTCTTTA GCCGTCCTGA ACTGCGCGTG TTTGCCAGCT ACATGGACTG GGATAAACGA
CTGGATAATT ACTCCAGTGA AGATACGTTT GGCTCCACCG GCTTTAAAGC AGGCGGCGAA
TGGAACTTCG GTATCCAGAT GGAAACCTGG TTCTAA
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| Protein sequence | MKPSHLAVTI GLLLSSPFYV SAANTDSIEA RLNAMEQRLQ QAEARAQAAE ARADAAEKQT
QQLATRTTQT EQKTQQVEQR TTALAKQKSF ADGFEFHGYA RSGLSINDSA TSSKTDIGPG
MSPAGQTGGH IGRLGNEDDT YVEIKLEHKQ KLDNGATTRF KVMMADGQRS YNDWTATTSD
LNIREAFVEL GSLPTFTGAF KDTTLWAGKR FDRDNFDIHW LDSDVVFLAG TGGGIYDVKW
ADSAKSNFSL YGRSLGEITS LDNDIKNYVF TANNYVGPFQ FMLSGLTAKN NDVKQNTGTS
RDNTFVTNTN AGDKGYHAMV AYHGDSFYGL RDGTSKTAIL YGHGLGGEVK NIGADGNLTN
DANTWRFATY GTTALNKTWS FAPSILAQTS KDRYVNGDSY EWVTFNARLI QEITENFALA
YEGSYQYMDL DPRGYRSLNQ VSGGFYKLTF APTFKVGDIG NFFSRPELRV FASYMDWDKR
LDNYSSEDTF GSTGFKAGGE WNFGIQMETW F
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