Gene PC1_0283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0283 
Symbol 
ID8131196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp330467 
End bp331033 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content51% 
IMG OID644863563 
ProductMammalian cell entry related domain protein 
Protein accessionYP_003015878 
Protein GI253686688 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAACAA AGAAAACTGA AGTCTGGGTT GGTGTGTTTA TGTTGATCGC GCTGGCTGCC 
ATCCTGTTTT TATGCCTGAA AGTGGCGGAT CTCAAGTCGA TCGGCAGTGA GCCGACGTAC 
CGTCTGTACG CGACATTTGA CAACATTGGC GGGCTGAAAG CGCGTTCTCC AATCAGAATT 
GGCGGCGTGG TCATTGGCCG CGTGGCGGAT ATTTCGCTGG ACGAGAAAAC CTACCTGCCG 
CGCGTAGCGA TGGATATTCA GCAGCGCTAC GATCATATTC CTGATACCAG TTCTCTGGCC 
ATTCGTACTT CTGGTTTGCT GGGCGAACAG TATCTGTCAC TGAACATTGG ATTTGAAGAT 
GAGGATATGG GCACCACGAT CCTGAAGGAT GGCGGTGTGA TTCAGGACAC CAAGTCAGCG 
ATGGTGCTTG AAGATCTCAT CGGTCAATTC CTATATAAGA GCGGCGGTAA TAGCGAAGAT 
AATGCCGGTC AATCGGGTAC AGAGCCGGGT GCCGATCCTG CGGCAACCTC TGAGCACCAT 
AATGAACCCG TTCCTTCACA TCCATAA
 
Protein sequence
MQTKKTEVWV GVFMLIALAA ILFLCLKVAD LKSIGSEPTY RLYATFDNIG GLKARSPIRI 
GGVVIGRVAD ISLDEKTYLP RVAMDIQQRY DHIPDTSSLA IRTSGLLGEQ YLSLNIGFED 
EDMGTTILKD GGVIQDTKSA MVLEDLIGQF LYKSGGNSED NAGQSGTEPG ADPAATSEHH 
NEPVPSHP