| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0257 |
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| Symbol | |
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| ID | 8131170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 301120 |
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| End bp | 304950 |
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| Gene Length | 3831 bp |
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| Protein Length | 1276 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644863537 |
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| Product | hypothetical protein |
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| Protein accession | YP_003015852 |
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| Protein GI | 253686662 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3164] Predicted membrane protein |
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| TIGRFAM ID | [TIGR02099] conserved hypothetical protein TIGR02099 |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGGCGAC TGCCCGGAAT TGTAGTCATC ACGGGTGCCA CTCTTGTCGT GATGGTTGCG
CTGTTAGTTA GCGGCTTAAG ACTGGTGCTG CCGCAGCTCG ATCATTTCCG GCCACAGCTG
GTGGCCTGGG CGCAGTCTGC GGCGGGTGTC CCGTTAGAAA TCGGCTCGAT GACGGGGCGC
TGGGAGTCCT TTGGCCCCAC GCTGGAAATT GAAAAGCTTC GCACGTCTCT GCCGGAATCA
GACTGGCAGG TTGATCGCAT TACGCTGGCA TTGGATGTGT GGCAGTCACT GTTACACGGG
CGCTGGCAGT TCCGCGATCT CACGTTTCAC CAGTTAAAGC TCGATATTAA TAGCCCTTTT
ACTGGGCAGC AGCAGGACAG CAAACTGATG GAATCAGGAA AGGTCAGCGA CCTTTTCCTG
CGCCAGTTTG ACCACTTTGA CCTGCGTGAT AGCCACATTA CCTTTCTTAC CCCTTCCGGC
TCCCGCGCGG AGCTAAGCAT CCCACAGCTG ACCTGGTTGA ATTCCGACAA ACGTCATCGT
GCGGAAGGGT TGATCAGCCT GTCGAGTTTT AACGGCCAGC ACGGCGTGGT GCAAATGCGC
ATGGACTTGC ACGATGAGCA GGGGCTGCTC AGTAACGGCA CCTTCTACCT GCAGGCTGAT
AACATCGATA TGAAGCCTTG GCTCAGCCGT TGGATGAAAA ACAATACCGG GTTGGAAAGC
GCCGATTTTA GTCTGGCGGC CTGGCTGAAC GTCCGTGATG GCGGCATCCA CAGCGGAGAC
GTGTTCCTTA ATCAGGGGAC GGCCAACTGG GGTGACGGTC CTGATGCACA TCGTCTGAAT
GTGGATGACA TGACGCTACA TGTTAGCCGT CAGGAAAATG GCTGGCAGGT GGATGTGCCT
GAATTGAATC TGGCAACGGA TGGCACTGCC TGGCCGAAAG GGCGGCTCTC AGCCCTCTGG
CTGCCAAAAA ATGAACACAT GCTGGGGCCC GATCGGCAGG AAGAGCTGCG TATTCGTGCC
AGCAATCTGG CGCTGGAGCG GGTAAGCACG CTGTTGCCGC TGCTGTCCAG TACAACGCCA
GCGTTGAAAG AACGTTGGGC AGAACTGCAA CCGACGGGCA CATTGAATAC GGTTGCCGTC
GATATCCCTC TGCAACAGCC GGAGAGAAGC CGCTTTCAGG CCAACTGGCA GGACGTGAGC
TGGAAACAGT GGAAATTGCT GCCGGGGGTC GATCATTTTT CTGGTTCTGC CCGTGGCAGC
GCCGAGCGTG GTCAGGTCAG CGTAGCGTTA AAGCAGAGCA CGCTACCCTA TGTTGATATG
TTCCGCGCGC CGCTGGAAAT CCAGCAGGCC AGCGGCACGA TTGACTGGCG TAATGACGCG
CAGGGTTTGG CGCTTTGGAG TCATGGGCTG GATGTGCAGG CGAAATCGCT ATGGGCGAAC
GGTGATTTCC GTTACGAACA GCCAGTCAAA CAGGAGCCGA AGCTGGATAT TCTGGCGGGT
ATCCGCTTGA CCGACGCGGC GGATGCCTGG CGTTATTATC CTGAACAGTT TATGGGCACT
GAGCTGGTGG ACTATCTGAG CGGCGCGCTG AAAGGCGGTC GTGTCGATAA CGCGACGCTG
ATTTTTGCCG GTAATCCGCA GCACTTCCCG TATACGCATA ACGAAGGCCA ATTCGAAGTC
TGGGTGCCGG TGAAAGGGGC GACCTTCGAG TTTCAGCCGG GCTGGCCTGC GCTGACGCCA
CTGGATATTA ATCTGGATTT CGCCAACAAC GGTCTATGGA TGTTTGCGCC ACAAACCTGG
TTGGGCAAGG TGGAAGGCAA GAATATTAGC GCGGTCATTC CCGATTATGA AAAAGAGATG
CTGCTCATTG ATGGCGAGCT GGAAGGTCCG GGGCCTGAAG TGGGGAACTA TTTTAATCAA
ACACCGCTGA AATCCTCGTT GGGTACGGCG CTGGATGAAC TGAAAATTGG CGGGCCAGTG
AAAGGCTCGC TGCATCTGGA TATTCCGCTT GTCGGTGATG ATGTTCACGC CAGTGGTGAC
ATTGCGCTGA ACAATAACAG CCTGTACATC AAACCGTTGA ATACCACGAT TAAGAATCTC
ACGGGTAAGT TCCGCTATGA AAACGGCAAC TTACGCAGTG ACACGCTTCA GGCGAATTGG
ATGAATCAGC CGATGGCGGT CAACTTCACC ACAGAAGAAC AAGCGAAGGC CTTTCTGGTG
AATGTGGGCT TGCAGGGCGA CTGGCAGCCT GCGCTCTTGC CCGGCTTGCC AGCATCGGCA
AGCAAGGCGT TGTCCGGCAC GGCAGGCTGG AAGAGTACGG TTGCCGTCAA TCTGCCGCAT
ACCGGCAAGA CAACCTATGA GGTTGATGTT CAGGCTGATT TAAATAAAGT GAGTAGTCAC
TTACCTAACC CGCTAAATAA ACCGGCTGGT GAGAGCCTGC CGCTGGAAGT CAAAGCCAGC
GGTGATCTGA ATGGTTTCGC TATTCAGGGA CGGCTGGGCA AGGATAACCG CTTCAATAGT
CAATGGCTGC TGAAAGGCGA CACCGTGACG CTGGCGCGGG CAAGTTGGCA GAATGCGGCA
ACGGCGTCAC CTGCATTACC CGATGATTCC TCGCTGGTGC TCGATCTTCC GTCGCTGGAT
GCGGAAAGTT GGCTGGGGCT ACTGCCATCG CTGCGTGCCT CGGCATCGGC GGAAGGGAGA
AAGGCACAGA GTTCCCTTCG TTTCCCTGAA GCGGTGACCT TGCGTACGCC TGAACTGCAA
CTGTTGGGGC AGCAGTGGCA CGATCTGGAA ATTACGCGCA AAAATACGCT TGCTGGCAGT
GAAGTGAAGG CAAAGGGGCG TGAAATTGAC GGAACGGTTG AGATACCCAA TCGTGGTATG
TGGCGCAGCG ACATCAATTA TCTCTACTAC AATCCTCAGT GGAAAGGGAA TGAAGCGACT
AACCCGGTGG CGTTAGCAGA GAAAAAATCG CCGTTGAACG ACCCGAGTAT CAGCTTTGAA
GACTGGCCGT CGCTGGCGGT TAATTGTCGC CAGTGCTGGA TTATCGGGCA GAATATGGGG
CGTATTCAGG GAACGCTGCT GCCAGAAAAG GAAAAGTTAA CGCTGACGGA CGGCATCATT
GATACAGGTA AGGCTCGTCT GACGGTAAAC GGCACCTGGC AGGAAAATGC CGAAGGTGTA
CGGACCGCCC TAAAAGGCCG CCTGACCGGG GATAGTCTGG AGCAGAATGC TAACTGGTTC
GGCGTTGATT CACCGCTGAA GGCCGGTTCT TTCGATGTGG ATTACGACTT GTACTGGCGC
GGAACGCCTT GGGCACCGGA TATTGCCAGC CTGAGCGGAA TATTGCACAC GCGCATTGGT
AAAGGTGAAA TTGCCGAAGT GGGTGCGGGT CAGGCGGGTC AACTGCTGCG TTTATTGAGC
TTCGATGCGC TGATGCGTAA GCTGCGGTTT GATTTTAGTG ATACGTTTGG CCGTGGATTT
TACTTCGACT CGATTCGCAG CACCGCATGG ATTAAAGACG GCGTGTTGCA TACTGATGAT
ATGCTGATCG ACGGTCTGGA GGCGGATATC GCGATGAAAG GCGATCTCGA CCTCGCTAAG
CGACAGGTCA ATATGGAAGC GGTTATCGCC CCGGAAATTT CTGCGACGGT GGGCGTGGCG
ACCGCATTTG CCGTCAATCC GGTTATAGGG GCCGCGGTGT TTGCTGCCAG TAAAGTGCTG
GCACCGCTAT GGAACAAGAT TTCGCTGATT CGCTACCAGA TTTCCGGTAG CCTCGATCAG
CCAAAGATTC AGGAAGTGCT GCGTGAGCCG AACAAGAAGA AAGGCGAATA A
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| Protein sequence | MRRLPGIVVI TGATLVVMVA LLVSGLRLVL PQLDHFRPQL VAWAQSAAGV PLEIGSMTGR
WESFGPTLEI EKLRTSLPES DWQVDRITLA LDVWQSLLHG RWQFRDLTFH QLKLDINSPF
TGQQQDSKLM ESGKVSDLFL RQFDHFDLRD SHITFLTPSG SRAELSIPQL TWLNSDKRHR
AEGLISLSSF NGQHGVVQMR MDLHDEQGLL SNGTFYLQAD NIDMKPWLSR WMKNNTGLES
ADFSLAAWLN VRDGGIHSGD VFLNQGTANW GDGPDAHRLN VDDMTLHVSR QENGWQVDVP
ELNLATDGTA WPKGRLSALW LPKNEHMLGP DRQEELRIRA SNLALERVST LLPLLSSTTP
ALKERWAELQ PTGTLNTVAV DIPLQQPERS RFQANWQDVS WKQWKLLPGV DHFSGSARGS
AERGQVSVAL KQSTLPYVDM FRAPLEIQQA SGTIDWRNDA QGLALWSHGL DVQAKSLWAN
GDFRYEQPVK QEPKLDILAG IRLTDAADAW RYYPEQFMGT ELVDYLSGAL KGGRVDNATL
IFAGNPQHFP YTHNEGQFEV WVPVKGATFE FQPGWPALTP LDINLDFANN GLWMFAPQTW
LGKVEGKNIS AVIPDYEKEM LLIDGELEGP GPEVGNYFNQ TPLKSSLGTA LDELKIGGPV
KGSLHLDIPL VGDDVHASGD IALNNNSLYI KPLNTTIKNL TGKFRYENGN LRSDTLQANW
MNQPMAVNFT TEEQAKAFLV NVGLQGDWQP ALLPGLPASA SKALSGTAGW KSTVAVNLPH
TGKTTYEVDV QADLNKVSSH LPNPLNKPAG ESLPLEVKAS GDLNGFAIQG RLGKDNRFNS
QWLLKGDTVT LARASWQNAA TASPALPDDS SLVLDLPSLD AESWLGLLPS LRASASAEGR
KAQSSLRFPE AVTLRTPELQ LLGQQWHDLE ITRKNTLAGS EVKAKGREID GTVEIPNRGM
WRSDINYLYY NPQWKGNEAT NPVALAEKKS PLNDPSISFE DWPSLAVNCR QCWIIGQNMG
RIQGTLLPEK EKLTLTDGII DTGKARLTVN GTWQENAEGV RTALKGRLTG DSLEQNANWF
GVDSPLKAGS FDVDYDLYWR GTPWAPDIAS LSGILHTRIG KGEIAEVGAG QAGQLLRLLS
FDALMRKLRF DFSDTFGRGF YFDSIRSTAW IKDGVLHTDD MLIDGLEADI AMKGDLDLAK
RQVNMEAVIA PEISATVGVA TAFAVNPVIG AAVFAASKVL APLWNKISLI RYQISGSLDQ
PKIQEVLREP NKKKGE
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