| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0232 |
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| Symbol | |
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| ID | 8131145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 278118 |
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| End bp | 279263 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644863513 |
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| Product | Endonuclease/exonuclease/phosphatase |
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| Protein accession | YP_003015828 |
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| Protein GI | 253686638 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2374] Predicted extracellular nuclease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATCC GTATCGCCAG CTATAACGTC GAGAACCTGT TCCACCGTAC CGCGATTCTC
AACCTCCCCG ATTCCCGGCA GATTGACGCC TTATTGCAGC AGGTCAGGCA GCTTCAGCAT
CTTCTTGAAC AACCTCAATA TGACGATGCT CTGAAAGATC AGGTGTTCCG CCTTTCTATC
GCACTGCGCC CTTATATTGA TATCCGTACT GACGCAGGTA CGTTGGGGCG ATGGAAAAAA
GAGGACGCCG GCACCGGATT TAGGATCAAT AAAAGCTGCC GGGGACGTGG CGATTGGATC
GGCGAAATCG TGTTTAAGGC GCAGGAGTTC AGCAGTCAAC AGCGTAAGAA TACGGGCAAG
ATTATCACCC TGCTTAATGC CGACATTCTG TGCGCCGTTG AAGTCGAAAA CATGGATGTC
CTGCGTGATT TCAACAATCA GGTGCTGGGG GACGATAAAT TCAGCCAGTT CGTGATGATC
GACAGCCCGA ACGATCCACG CGGCATTGAT GTTGCCTGCC TGACGCGCTA TCGGATTGCC
CAGCTCCGCA CGCATATTTT TGATGCCGGA AAGCGTTTCG ATCCCGTATT TAGTCGTGAC
TGCCTCGAAG TGACGCTGGA TGCCGGTCTC AAACAGCCGA TTTATATTCT GTGTAACCAT
TTCAAAAGCC AGAGTGGCCA AACGGAAGAA GAGCGGCTGC GTGGGGCGGA GAAGCGTCGC
GATCAGGCCG AACGCGTCGC GGAGATTGTG CAACAGACTT ACGATCTCAA GAAGGACTAC
GTGGTCATTC TCGGCGATTT GAACGAGGAT TCGTCAAACC CCTGGCACAG TTTGGCTCCG
CTGTTTTCTC TGTCGGATTT ACACCCGGTT ATCGACCCTG AACGCCCGGA AAAAGAGCGC
TACACCTACT ATTTCGCTGG CGGAAAGAAA GGGGCTCGGT TAAACCAATT GGACTACATT
TTCTTATCTG CACCGCTGCA TCAGGCGGTG GTGGAGTGGG GCGTCGAGCG CCGTGGCATT
TATAATATCG ACAAGATTGC CGCCAAAGAG GGCGCGGAAC CCGTTACGCC GCTACCAGAA
GTCACCTCAT GGGACACAGC GGCGTCCGAC CATGCCGCGC TCTGGGTAGA AGTGGATATT
ACCTGA
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| Protein sequence | MKIRIASYNV ENLFHRTAIL NLPDSRQIDA LLQQVRQLQH LLEQPQYDDA LKDQVFRLSI
ALRPYIDIRT DAGTLGRWKK EDAGTGFRIN KSCRGRGDWI GEIVFKAQEF SSQQRKNTGK
IITLLNADIL CAVEVENMDV LRDFNNQVLG DDKFSQFVMI DSPNDPRGID VACLTRYRIA
QLRTHIFDAG KRFDPVFSRD CLEVTLDAGL KQPIYILCNH FKSQSGQTEE ERLRGAEKRR
DQAERVAEIV QQTYDLKKDY VVILGDLNED SSNPWHSLAP LFSLSDLHPV IDPERPEKER
YTYYFAGGKK GARLNQLDYI FLSAPLHQAV VEWGVERRGI YNIDKIAAKE GAEPVTPLPE
VTSWDTAASD HAALWVEVDI T
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