| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0229 |
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| Symbol | |
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| ID | 8131142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 274931 |
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| End bp | 275956 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644863510 |
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| Product | extracellular solute-binding protein family 3 |
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| Protein accession | YP_003015825 |
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| Protein GI | 253686635 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGAA TAGTGATTTC TACTCTGGTT GCTGGCGCGT CACTCTTTGC CGCAATCAAT
CAAGCCCATG CTGGTGCAAC GCTGGACGCG ATTCAGAAGA AAGGATTTGT ACAATGCGGT
ATCAGCGATG GCTTGCCCGG TTTTTCCTAT GCAGACGCCA GCGGCAAATA CTCCGGTATT
GATGTTGACG TATGTCGCGG ACTTGCTGCC GCCGTATTCG GCGATGCCAA TAAAGTCAAA
TATACGCCGC TGACAGCAAA AGAGCGTTTC ACTGCGCTGC AATCCGGCGA AGTTGACGTG
CTATCACGCA ACACGACCTG GACCTCCTCC CGTGACGGCG GCATGGGCAT GCTCTTTACC
GGCGTCACCT ACTACGACGG CATTGGCTTC CTGACGCACA ACAAAGCAGG CTTAACCAGC
GCCAAAGAGC TGGACGGCGC AACCGTTTGT ATTCAGGCGG GTACCGATAC CGAACTGAAC
GTCGCTGACT ACTTCAAGAC TCATAAGATG CAGTACACCC CTGTCACGTT CGATCGCTCT
GATGAAAGTG CCAAAGCACT GGAGTCTGGC CGCTGCGATA CGTTGGCATC AGATCAGTCA
CAGCTGTACG CACTGCGTAT CAAGCTGAGC AAACCTGCCG AATTTATCGT CCTGCCAGAA
GTCATCTCTA AAGAGCCGCT GGGCCCGGTG GTACGTCGTG GTGATGAAGA GTGGTTCTCG
ATCGTCCGCT GGACATTGTT CGCGATGCTG AATGCCGAAG AGATGGGTGT GACTTCGAAA
AACGTCGACC AACTGGCAGC AAAACCCACC ACGCCAGATA TGTCCCACCT GCTTGGTCAC
GAAGGCAGCT ACGGTAAAGA TCTCAAATTA CCAAACGACT GGGCATTCAA AATCATCAAA
CAGGTCGGTA ACTACGGCGA AATCTTTGAA CGTAATGTCG GTATGGGCAG CGAGTTGAAA
ATTAAGCGTG GCCTGAACGA ACTGTGGAAC AAAGGCGGGA TCCAGTACGC GCCAGCGGTA
CGTTAA
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| Protein sequence | MKRIVISTLV AGASLFAAIN QAHAGATLDA IQKKGFVQCG ISDGLPGFSY ADASGKYSGI
DVDVCRGLAA AVFGDANKVK YTPLTAKERF TALQSGEVDV LSRNTTWTSS RDGGMGMLFT
GVTYYDGIGF LTHNKAGLTS AKELDGATVC IQAGTDTELN VADYFKTHKM QYTPVTFDRS
DESAKALESG RCDTLASDQS QLYALRIKLS KPAEFIVLPE VISKEPLGPV VRRGDEEWFS
IVRWTLFAML NAEEMGVTSK NVDQLAAKPT TPDMSHLLGH EGSYGKDLKL PNDWAFKIIK
QVGNYGEIFE RNVGMGSELK IKRGLNELWN KGGIQYAPAV R
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