| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0207 |
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| Symbol | |
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| ID | 8131115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 248141 |
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| End bp | 249538 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644863483 |
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| Product | shikimate transporter |
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| Protein accession | YP_003015803 |
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| Protein GI | 253686613 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACACCT CAACTACGCC AACACTCTCA CAGCCTGGCG GCTCAGTACT TCATCAGGAT
GATTCAATTT CATCTGATAA CGCCCTACAA ACACAGTCAG TAAGCCATTC TCAGAATAAA
GCGAAACGTG CCGCCTGGGG CAGCTTTGTG GGGGCCGTGG TGGATTGGTA TGATTTCTTG
CTGTACGGAA TTGTTGCCGC TCTTGTATTT AATACCGAAT TTTTCCCTCA GGTCAGCCCG
ACAATGGGGA CGCTGGCAGC ATTTGGCACG TTTGGCGTGG GGTTTCTATT CCGTCCGCTT
GGCGGTATGG TGTTTGGGCA CTTCGGCGAT AAGCTGGGTC GTAAACGGAT GTTGATGATC
ACGGTCTGGA TGATGGGCAT TTCCACCGCG CTGATTGGCC TGTTGCCGTC GTTTGACTCC
ATCGGTTGGT GGGCGCCGGT GCTGCTGGTT ATGCTGCGAG CCATTCAGGG CTTTGCTGTC
GGTGGCGAAT GGGGCGGTGC GGCGCTGTTG GCGGTAGAGA GCGCGCCAAA GAAGAAGAAA
GCCTTTTACA GCAGCGGCGT ACAGGTTGGC TTTGGGGTCG GGTTATTACT GGCTACAGGG
TCGGTCTCGC TGGTTAGCAA TTTGACGACC AACGAAGAAT TTATCACCTG GGGCTGGCGT
TTGCCGTTCT TATTCAGCCT GATTCTGGTT GCGATTGCCT GGTGGGTGCG TAACGGGATG
GATGAGTCTC AAGAGTTTGA GGCGAATAAG ACTCTGGGAG AAAGGGCAAA CAAACTGCGT
TCGTTCCCCA TTATGGAAGC ACTACGCCAA CACCCGAAAG CCTTTCTGCT GATTATTGCG
CTACGGCTTG GAGAACTGTT GACGATGTAT ATCGTCACCG CGTTTGCGCT CAATTACTCC
ACCACTCATC TTGGGCTATC GCGGGATATT TTCCTGAATA TCGGGCTGCT GGTGGGGGCG
ATCAGCTGCG TGTCTATTCC TTTCTTTGCC TATCTGGCGG ATAGCTTTGG CCGACGTCGG
ATCTACGTTA CTGGTGCGCT GATTGGTGCC GCGAGTGCAG TGCCGTTCTT TATGGCGCTG
GAAAGCCATA ACACGCTGCT GATTTTGTTC TTTGCCATCA TGCTGGCGAA CATTGCCCAC
GATATGATTG TTAGCGTACA GCAGCCGATG TTTACCGAGC TATTTGGTAC CGCTTATCGC
TATAGTGGAG CGGGGGTGGG TTATCAGGTT GCCAGCGTGG TAGGCGGCGG ATTTACGCCT
TTTATCGCTG TTCTGCTGGT GCAGTTTATG GATGGTTCAT GGCACGCCGT GGCGGCTTAC
CTCGCCATTG GCTGTTTGCT GTCGGCGATT GTCGGGATGC AAATGAAAGC AAAATCGGCG
GATGCCTTAC CTCGCTAA
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| Protein sequence | MDTSTTPTLS QPGGSVLHQD DSISSDNALQ TQSVSHSQNK AKRAAWGSFV GAVVDWYDFL
LYGIVAALVF NTEFFPQVSP TMGTLAAFGT FGVGFLFRPL GGMVFGHFGD KLGRKRMLMI
TVWMMGISTA LIGLLPSFDS IGWWAPVLLV MLRAIQGFAV GGEWGGAALL AVESAPKKKK
AFYSSGVQVG FGVGLLLATG SVSLVSNLTT NEEFITWGWR LPFLFSLILV AIAWWVRNGM
DESQEFEANK TLGERANKLR SFPIMEALRQ HPKAFLLIIA LRLGELLTMY IVTAFALNYS
TTHLGLSRDI FLNIGLLVGA ISCVSIPFFA YLADSFGRRR IYVTGALIGA ASAVPFFMAL
ESHNTLLILF FAIMLANIAH DMIVSVQQPM FTELFGTAYR YSGAGVGYQV ASVVGGGFTP
FIAVLLVQFM DGSWHAVAAY LAIGCLLSAI VGMQMKAKSA DALPR
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