Gene PC1_0189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0189 
Symbol 
ID8131089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp218595 
End bp219236 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content52% 
IMG OID644863457 
ProductDNA-binding transcriptional repressor FabR 
Protein accessionYP_003015785 
Protein GI253686595 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.368893 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGGCAGCA TAATGGGTGT CAGAGCACAA CAAAAAGAAC GGACTCGTCG TTCCCTTATT 
GAAGCTGCAT TTAGCCAGTT AAGCGCTGAG CGCAGTTTTG CCAGCCTGAG TCTGCGTGAA 
GTTGCCCGAG AAGCGGGTAT CGCGCCGACA TCTTTCTATC GTCATTTTCG TGACGTGGAT 
GAACTGGGGC TGACAATGGT TGATGAAAGC GGGCTGATGC TGCGTCAGTT AATGCGGCAG 
GCCCGGCAGC GTATTGCCAA GACTGGTAGC GTCATCAGGA CGTCGGTTTC CACCTTCATG 
GAATTTATTG GCAATAATCC TAATGCGTTC CGGCTGTTGC TGCGTGAACG CTCAGGGACG 
TCGGCGGCCT TTCGTGCGGC AGTCGCGCGC GAAATTCAGC ATTTCATCGC TGAACTGGCG 
GATTATCTTG AGGTGGAAAA CCATATTCCC CGCAGTTTTG CGGAAGCGCA GTCGGAAGCG 
ATGGTGACGA TTGTTTTCAG CGCGGGGGCA GAAGCTCTGG ATGTTTCTCT GGAACAACGT 
AAACAGCTGG AAGAGCGGCT GGTACTGCAA CTGCGGATGA TCGCCAAAGG TGCTTATTAC 
TGGTACAGAA AAGAACACGA TAGTAGCTTT ACCGTGCCAT AA
 
Protein sequence
MGSIMGVRAQ QKERTRRSLI EAAFSQLSAE RSFASLSLRE VAREAGIAPT SFYRHFRDVD 
ELGLTMVDES GLMLRQLMRQ ARQRIAKTGS VIRTSVSTFM EFIGNNPNAF RLLLRERSGT 
SAAFRAAVAR EIQHFIAELA DYLEVENHIP RSFAEAQSEA MVTIVFSAGA EALDVSLEQR 
KQLEERLVLQ LRMIAKGAYY WYRKEHDSSF TVP