| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0180 |
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| Symbol | |
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| ID | 8131080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 209550 |
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| End bp | 210683 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644863449 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003015777 |
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| Protein GI | 253686587 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4134] ABC-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGTA TTTTTGCTGC AACGCTGATG TTGAGTACGC CACTGGCTGC TGTACAGGCT
CAGGAATTAA CGGTGTTGAC GGCGGGTGAC CAGAACATGG TCGACTATGT AAATGAATAT
CTGGGGCCGC TGTTTGAGAA GCAGCATCCC GGCGTAAAAG TACGTGCGGT CGGCACCGGA
CCGGGTGATG CGGGGTCGCA GAAGATTCTT GAGCGTTTCA ATGCACAACA GGCCGCTGGC
GCCAAAGTCT GGGACACCGA TGTTGCGGTC GTGCATGAGA AATTTGTCGG TCCGATGGTG
CAAAAGGGCG ACCTGCTGAA ATATCGCGAT GATATCGCCA GCGGCAAGCT GGTTAGCATG
GCCGCAGCGG ATAAAGCCAT GGGGACGGAC GTGAAAGGCT ATGTCATGCC GATGTTCAGT
AGCCAGACGG CGCTAGCCTA TAACCCCGAC ATGGTGGCTA ATCCGCCGAA AAGCTATGAC
GAAATCCAGC AGTGGGCTGC CGCGAATCCG AAGATGTTCG GCTACAACGG GATTAAAGGC
GGCGCATCGG GCGTCAGCTT CGTGATGGGT TGGATTTACG CTTACGGCGG CGATGCCCAG
AAGCTGATGA ACGGACCGTT TGACGAAGCG GAAGCGAAAA AATGGCAGCC AGCGTTTGAG
CGGCTGAAAG CCTTTAATAA GAACGTGACG TTAACGCCGG GCAACGCTGG CACGCTCGAT
ATGTTGAGTC GTGGTGAAAT TGCCATGGGA CCGGTGTGGG TCGACATGTT CTATTCCTGG
AAAGCGAGTG GGCAACTGCC GGACAATTTC AAATTGCTGC TCCCTGCACC CGGTATGCCG
GGACAGCCGA TGCACTACGT CATCCCTGCG CAGGCACCGA ACCGCGAACT GGCTAAGCAG
TTTGTTGAAC TGGCAACCAG CGCCAAAGTA CAGGCTGAAG GGATTGTGGA ACGCTTTAAC
TGGTATCCGG GGATTGATGC CAAATACGTT CAGGCCGAGT TGAAACCCGC GGTCTGGCAA
CGTCTGTTCA CCGATGTGAC GCCTGACGAG CTGGCAAACA AAGGAAAAAC GTTCCCTATC
GCGCCTTACC ACACCGCGAT TTTAAACGCC TATGAGCAGG CGATGGCGAA GTAA
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| Protein sequence | MKRIFAATLM LSTPLAAVQA QELTVLTAGD QNMVDYVNEY LGPLFEKQHP GVKVRAVGTG
PGDAGSQKIL ERFNAQQAAG AKVWDTDVAV VHEKFVGPMV QKGDLLKYRD DIASGKLVSM
AAADKAMGTD VKGYVMPMFS SQTALAYNPD MVANPPKSYD EIQQWAAANP KMFGYNGIKG
GASGVSFVMG WIYAYGGDAQ KLMNGPFDEA EAKKWQPAFE RLKAFNKNVT LTPGNAGTLD
MLSRGEIAMG PVWVDMFYSW KASGQLPDNF KLLLPAPGMP GQPMHYVIPA QAPNRELAKQ
FVELATSAKV QAEGIVERFN WYPGIDAKYV QAELKPAVWQ RLFTDVTPDE LANKGKTFPI
APYHTAILNA YEQAMAK
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