Gene PC1_0173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0173 
Symbol 
ID8131073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp200777 
End bp201787 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content60% 
IMG OID644863442 
Producttransport system permease protein 
Protein accessionYP_003015770 
Protein GI253686580 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.498895 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCCCAA CATCTTCACG TTATGCCGCA ACCTTTGTCG TTGCGCTACT GATATTGGCA 
GGGCTGATGC TGGTAAATAT TGCGACTGGC AGTACGACGA TTCCCCTTAC TCAGGTCGCC 
AGCGTCTTAG GGTTATCATC GGCGGATGTC TCACCGATGG CATCACGCAT CATTCTGGAA 
CTGCGCATTC CCCGTAGCCT GCTGGCGGCA CTGTGCGGTG CGGGGTTAGC GATGGTCGGG 
GCCTTTTTGC AAACGGCAAC CCGTAACGAT CTGGCTGACC CTTTTCTGTT CGGCCTGTCT 
GCCGGTGCCT CGGCGGGGGC GGTCGCAGTC ATCACCCGCT TTGGTGAGCA GCTCGGTGAC 
TGGGCGCTGC CGATGGCGGC TTTCTGTGGC GGTATTCTAT CGGCCGTCGC CGTGACCGTG 
CTGTTTCTGC TGCAACAGGC GCGCGGTGCA GAACGCCTGA TCATTTGCGG ATTGGCGATC 
TCGTTTCTGT TCGGCGCACT GACGAACTAT CTGGTGTTTT CCGGCGATCA GCGAGCTGCC 
AGCTCGATTC TTTTCTGGTC GCTGGGCGGG CTGGGCCTTG CTCGTTGGGA CACGTTACCT 
TTTGCGGTGT TCAGCGTTCT GCTGCTATTC GGCCTCACCG CCCTACGCTG GCGCGCGCTT 
GATGCTCTGC TGGCGGGCGG GCAAACTGCC GCCTCAATGG GGGTTAACCT GTCTCGCGTA 
CGGGTAGAAA TTTTCATCTG CTGCGCGTTC GCTACGTCAC TACTGGTCGC GCTGACCGGC 
GTGATCGGTT TTATCGGCCT GATGATCCCC CATCTGGCCC GCCCGCTGAG CGGCGTGCTA 
CACAAGAGGC TTCTGCCAAT GACAGCCGTA CTGGGCGCGA TATTGCTGTG CGGCGGCGAT 
TGGCTCAGCC GACAGCTACT GGCACCACAG GAATTGCCCA TCGGGATTAT TACGGCAGGG 
CTAGGCGGCG TCTTCGTTCT GGGGATGCTG GTAAAACGTC AGCAGGGATA A
 
Protein sequence
MSPTSSRYAA TFVVALLILA GLMLVNIATG STTIPLTQVA SVLGLSSADV SPMASRIILE 
LRIPRSLLAA LCGAGLAMVG AFLQTATRND LADPFLFGLS AGASAGAVAV ITRFGEQLGD 
WALPMAAFCG GILSAVAVTV LFLLQQARGA ERLIICGLAI SFLFGALTNY LVFSGDQRAA 
SSILFWSLGG LGLARWDTLP FAVFSVLLLF GLTALRWRAL DALLAGGQTA ASMGVNLSRV 
RVEIFICCAF ATSLLVALTG VIGFIGLMIP HLARPLSGVL HKRLLPMTAV LGAILLCGGD 
WLSRQLLAPQ ELPIGIITAG LGGVFVLGML VKRQQG