Gene PC1_0171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0171 
Symbol 
ID8131071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp200062 
End bp200472 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content47% 
IMG OID644863440 
Producthypothetical protein 
Protein accessionYP_003015768 
Protein GI253686578 
COG category[S] Function unknown 
COG ID[COG1598] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTATC CCATTGCAAT TGAAGCAGGC GACGATACTC ACGCATACGG CGTAACAGTA 
CCAGATTTAC CGGGCTGTTT TTCTGCAGGC GATACGCTAG ACGATGCTAT CACAAACGCT
AAAGAAGCGA TTACCGGACA TATCGAGCTA CTGGTTGAGA TGGGTCAGGA TATTCCCACC
GTATCAACAG TAGGTCAGCT GGCAAAAAGG TCTGAGTATG CAGGGTACAC GTGGGCGGTT
GTTGATATTG ATGTAACTCG TTTAATGGGC GGCTCAGAAA AAATTAACGT TACATTGCCC
AAATCGCTGA TTGACCGCAT TGATCGTTGC GTGGCGAGTA ATCCAGAATT TAAAAGTCGT
TCGGGTTTTC TTGCACAGGC GGCATTAGAG CGAATTTCGT CTTCCCGATG A
 
Protein sequence
MFYPIAIEAG DDTHAYGVTV PDLPGCFSAG DTLDDAITNA KEAITGHIEL LVEMGQDIPT 
VSTVGQLAKR SEYAGYTWAV VDIDVTRLMG GSEKINVTLP KSLIDRIDRC VASNPEFKSR
SGFLAQAALE RISSSR