Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0171 |
Symbol | |
ID | 8131071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 200062 |
End bp | 200472 |
Gene Length | 411 bp |
Protein Length | 136 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644863440 |
Product | hypothetical protein |
Protein accession | YP_003015768 |
Protein GI | 253686578 |
COG category | [S] Function unknown |
COG ID | [COG1598] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTTATC CCATTGCAAT TGAAGCAGGC GACGATACTC ACGCATACGG CGTAACAGTA CCAGATTTAC CGGGCTGTTT TTCTGCAGGC GATACGCTAG ACGATGCTAT CACAAACGCT AAAGAAGCGA TTACCGGACA TATCGAGCTA CTGGTTGAGA TGGGTCAGGA TATTCCCACC GTATCAACAG TAGGTCAGCT GGCAAAAAGG TCTGAGTATG CAGGGTACAC GTGGGCGGTT GTTGATATTG ATGTAACTCG TTTAATGGGC GGCTCAGAAA AAATTAACGT TACATTGCCC AAATCGCTGA TTGACCGCAT TGATCGTTGC GTGGCGAGTA ATCCAGAATT TAAAAGTCGT TCGGGTTTTC TTGCACAGGC GGCATTAGAG CGAATTTCGT CTTCCCGATG A
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Protein sequence | MFYPIAIEAG DDTHAYGVTV PDLPGCFSAG DTLDDAITNA KEAITGHIEL LVEMGQDIPT VSTVGQLAKR SEYAGYTWAV VDIDVTRLMG GSEKINVTLP KSLIDRIDRC VASNPEFKSR SGFLAQAALE RISSSR
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