| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0144 |
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| Symbol | |
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| ID | 8131044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 172354 |
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| End bp | 174624 |
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| Gene Length | 2271 bp |
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| Protein Length | 756 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644863414 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003015742 |
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| Protein GI | 253686552 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.398028 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATTTAA AAAAACACCA GCAGTATTTA AAAGAACACC AGCGAAAAAT AACATCGGGT
ATTTTAATGA GCTGCGTCTT AACGCTTCCT GCTATGGCGC GAGCAGCCGA TCCGCAAATC
ACAACGGATA ACGTTCCACG AACCGAGGCA ACAACCGCCG CCCCCGTTCA ACTAAAGCGT
GTGAAAGTGA ATGCTCAGCG TACGCCTGTT CAACCGCCGA CCACGCTGGC ATCGGTGATC
GATGGCAAAA CGCTCGAAGA AGAACGGGTG TATCGCTTTG AAGAACTGTC GCAACTGGTA
ACAGGGCTGG ATGTCGATAC CGTCGATGTG ATGGACACCA CCGTGACCAT TCGTGGGATT
GGCGACGGCG GCGAGAGCGG TACGAATATC GGTATGCCGG GCAGCGTAGG GCTGTTTGTC
GATGGCGTTT ACTTATCCCG CCCCGGCGTC ATCTCTAATG ACTTGCTGGA TATCGACAGC
ACGCGCGTAT TGAAAGGCCC ACAGGGGGCA GCCTACGGCT TTAACACCAC CGGCGGCGCT
ATTGATATTC GCACCCGCAA GCCAACCTTC ACACCGGAAT ATTCACTGGA ACAATCCTTC
GGGCAGCGCG GTTACCTGCA ATCCAAACTG ATGGCATCCG GGCCACTCAG CGACCACTGG
GCGGGACGCA TCAACCTGTC GCGCACGGAA CGCGGTGGAA ACGTCACGAA TATAGAAAAC
GGCCATAAGC TGGGAGGCAG CACCAATAAC GGCGTGCGCG GCCAACTGCT TTATCAGCCT
AATGACAGTT TTAGCCTCAG AATTACCGGC GACTACAGCG ATTCCACGCA GCGTCCAGTC
TCGGTACTCG TGAGCGCAAC CGACGATTTT CGTAATCGCG CCCAACAGAC TGGCCTTAAG
GTCGTCGGCG ATCGCCAGGT CGCCATGGAT GACGAGAATG TTATTCGTGT TGCGCAAGGC
GGTGGCTCGG TAGAGGCCAA TTGGAGACTG AAAAATGGCT ATAGCGTCAA TTCGCTGTCG
TCACTGCGCT ATTTCCGCGT ATTACCCAGC ACGGCGGATA ACTGGAATAT TCCGCTCTAT
CACGATAGCG GCGCTGATGT ACGCGATCGC GTCTGGTCAC AAAGTTTTTG GCTGGATTCG
CCCAAAGGCA ACACGTTCGA TTATTCACTG GGCGTCGATT ACTGGGGAGA GAACCTCGAT
ACCGAGGCAA ACAGTCGCTA CTACAACGAC AACCGCGTGC GGACATGGGT AGGAAATGGC
TATCAGGGCA TTAACGTTCA GCGCTTTGGC ACGCTGGATG ACACCGTTTA TTCCGTCTAT
GGCCGCGGAA CCTGGCATGC CGCCGATAAA CTGGATGTGA TTGTCGGCCT GCGCCAGACC
TATGAGAAAA AGGAGGGGAC GTTTGTGCGC AAAAATCGCG CAACCTTTGA CTCTGGCCCG
CTTTCGCAAA CCAACCGCCT GCCTTCGGGT TCCATCAGCC TGAACTGGTT TGCAGCACCG
AATGTGACTC CGTACGTCAC GCTGGGCTAC GGGGAAAAAT CCGGTGGCCT GAACGTCTCA
TCTGGGGCAG CAAGACAGCT GGGGATCGAT TCGCTGTACG TCGATCCAGA GAAAACCCGT
TCCGCGGAAC TGGGGGTTAA AACTCACTGG CTACAGCGCA AAGTGGAATG GAATACCGCG
CTGTTCTGGA GCGTCGTCGA AGATTTCCAG AACAATGCCT ATGACGAGGA AACGGATACC
AGCTATCTGA TTAACGCCGG GAAATTCCGC TCGCGCGGCG GCGAAACGCA ACTGACGGTG
CGCCCGATTG ACGGGTTGAG CATCAGTCTG GCCGGTACCG TTCTGGATGC CCGTTACCTG
AATTTCCCTA ACGCCCGCTG CCCGGCAGAG ATCTCCGCCG TCTCGTGCGA TATGTCGGGG
AAACGTGTCT TCAAGTCCCC GACGCTGAGC TATAACACGC GTGTGCGTTA CCAATGGGAT
ACGCCAAATA ATCTGCAAGC CTCGGTTTCC GGTCAATGGT CATGGCGGAG CTGGGCCTAC
GGTACGCTCG ACGATTCCGA ATACAACCGC ATTCCAGCGT ATGGCGTCCT GAACCTATCT
AGCGGGCTGA GCGGCAAGCA AGGTGACAAC CGCTGGAACG TATCGCTATG GGTGAAAAAT
GCGCTGGATA AAAACTACTA CCGATCCGTC AGAGGCTCCA GCGCCACAAC GGGTGTGATA
GGTGAACCGC GCATGGTCGG AATATCAGTC GGCTACGACT TCAAGGGCTA A
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| Protein sequence | MYLKKHQQYL KEHQRKITSG ILMSCVLTLP AMARAADPQI TTDNVPRTEA TTAAPVQLKR
VKVNAQRTPV QPPTTLASVI DGKTLEEERV YRFEELSQLV TGLDVDTVDV MDTTVTIRGI
GDGGESGTNI GMPGSVGLFV DGVYLSRPGV ISNDLLDIDS TRVLKGPQGA AYGFNTTGGA
IDIRTRKPTF TPEYSLEQSF GQRGYLQSKL MASGPLSDHW AGRINLSRTE RGGNVTNIEN
GHKLGGSTNN GVRGQLLYQP NDSFSLRITG DYSDSTQRPV SVLVSATDDF RNRAQQTGLK
VVGDRQVAMD DENVIRVAQG GGSVEANWRL KNGYSVNSLS SLRYFRVLPS TADNWNIPLY
HDSGADVRDR VWSQSFWLDS PKGNTFDYSL GVDYWGENLD TEANSRYYND NRVRTWVGNG
YQGINVQRFG TLDDTVYSVY GRGTWHAADK LDVIVGLRQT YEKKEGTFVR KNRATFDSGP
LSQTNRLPSG SISLNWFAAP NVTPYVTLGY GEKSGGLNVS SGAARQLGID SLYVDPEKTR
SAELGVKTHW LQRKVEWNTA LFWSVVEDFQ NNAYDEETDT SYLINAGKFR SRGGETQLTV
RPIDGLSISL AGTVLDARYL NFPNARCPAE ISAVSCDMSG KRVFKSPTLS YNTRVRYQWD
TPNNLQASVS GQWSWRSWAY GTLDDSEYNR IPAYGVLNLS SGLSGKQGDN RWNVSLWVKN
ALDKNYYRSV RGSSATTGVI GEPRMVGISV GYDFKG
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