| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_4253 |
|---|
| Symbol | |
|---|
| ID | 8120178 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 4801883 |
|---|
| End bp | 4804009 |
|---|
| Gene Length | 2127 bp |
|---|
| Protein Length | 708 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644854628 |
|---|
| Product | N-6 DNA methylase |
|---|
| Protein accession | YP_003006523 |
|---|
| Protein GI | 251791802 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0286] Type I restriction-modification system methyltransferase subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.196682 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGGTG AAACCCACCG TCAGCTGGCG AACTTCATCT GGTCCATCTG CAACCTGCTT
CGTGGCCCCT ACAAACGCAA TGAATATCGC AAGGTCATCC TACCTTTGAC CGTCTTGCGA
CGTTTTGAAT GCCTGCTTGA ACCAACTCGC CAAGACGCTC TTGCTGAGTT CCAATGGCTC
AAGACTAAAC CAGAACGTGT CCAGCAGGCT CGTTTGCAGC AGATCACCGG CTACCGTTTC
TATAACCTGT CGAGGATGCA GCTCACACTG TCGGGCGAAA ATATTCACTC GCTGCTAGAT
GACCCTAACA ACCTTGCACC GAACCTGAAC AGCTACATCA ACGGCTTCTC TGCCAACGTC
CGCGCCATCA TGGAGAGGTT CAAATTCAGC GAACAGATCA CCCACATGGC GGAAAAAAAC
ATTCTGTTCG AGGTGGTCAA AGCCTTTGCC AAAATCGACC TCTCGCCCCA GCGAGTGGAC
CAGATGCAAA TGGGCTACGT GTTCGAAGAG TTGATCCGGA TTGGCGCGGA ACAATCCAAT
GAAGAGGCTG GGGAGCACTT TACCCCGCGC GAAGTGATCA AGTTGATGGT CAATCTGCTG
CTGGCTCCGG AAGAGGATCT GGCCAAGAGC GACGTGGTCA AGACCATCTA TGACCCCGCC
TGCGGCACAG GCGGTATGCT GTCGGTGGCC GAAGAGTACA TCCGCCACCT CAACAGCGAC
GCCCGCCCCC ATCTTTACGG CCAGGACTGG AATGATGAGG CCTGGGCGGT GTGCAAGTCC
GATATGCTGA TCAAGGGAGA GGACGCCGAC AACATCATCT TGGGCGACAC CTTCACCCGC
GATGGCTTTG ACCGAGACTC AGATGGCAAC AAGTGGATAT TCGACTATAT GCTGGCCAAT
CCACCCTTCG GCGTGGAGTG GAAGCAGCAG CAGAAATACA TCCAGAAAGA GGCCGACGAG
CTCGGTTATG CCGGACGCTT CGGTGCAGGA ACCCCGCGCA TTAACGACGG AGCGCTACTC
TTTTTGCAGC ATATGATTTC CAAGATGCGG CCCGTCAACA AAGACGGCAG CCGCATCGGC
ATCGTCTTCA ACGGATCGCC TCTCTTCACC GGCGATGCGG GCAGCGGTGA GAGTGAGATC
CGCCGTTGGA TCATTGAGAA TGACTGGCTG GAAGCCATCG TCGCCCTACC GGAACAGCTC
TTCTACAATA CTGGAATTGC CACCTATATT TGGGTCATTA CCAATCGCAA GGCTAAGGAG
CGCAAAGGCA AGGTGCAGCT CATCGACGCC CGCAACTTTT GGGTACCGAT GGAAAAGTCC
CTTGGCAACA AGCGCCGCCG TATCGGCGAC CCGCAAGACA GGCCCAAAGA CCCGAACCAT
ATAGCCGAAA TCACCCGCAT CTACGAGAAC TTCCAGGACG GCGAAACTCG TACTTTCTTC
CTCGATGGCA AGGAAAAGGA GTTGGTAGTC AGCAAGCTGT TCGACAACGA CGACTTTGGC
TACCACAAGA TCACCGTCGA GCGTCCCCTC CGTCTCAACT TTCAAGCCAC GGCCGAGCGT
ATCGCCCGCC TGGAGGAGCA AACAGCCTTC AAGAATCTTG CCTCCAGCAA CAAGAAGAAC
GAAACAGTCC GCCAGCAGGA GATCGAGGCA GGTAGGGCGC GACAGCAAGA GATCCGCAAC
CTGCTCGCCG ACTTTGCTGA CCAGCACGGC GATACCCTGT ACAAAGATCG CAAGCTATTC
TTGCTTGCCC TACGCGAGGT GGACCGCGCC AGAAACATCA AACTCTCCGC CGCCGAGCTG
AAAGCGGTGA TCGCAGCTCT AGGTGAACGG GACGAGACCG CCGAAATATG CAAGGACAAG
AAAGGTGAGC CGGAAGCGGA TACCGACCTG CGCGACACAG AGACGGTACC TCTCAAAGAA
AGCATCGAGG AATACTTCCA ACGCGAGGTG TTGCTTCATG TGCCCGACGC CTGGATAGAC
TATGCCAAGA CCAAGATCGG CTATGAGATC CCCCTTAATC GTCACTTCTA CCGCTATGAA
GAGCCACGTG AACTAACCGA AATAGAAGCC GAAATAAAAG GGTTGGAAAG CGAGATTCTC
GAATTGCTTA AAGAGGTGAC TGCATGA
|
|---|
| Protein sequence | MNGETHRQLA NFIWSICNLL RGPYKRNEYR KVILPLTVLR RFECLLEPTR QDALAEFQWL
KTKPERVQQA RLQQITGYRF YNLSRMQLTL SGENIHSLLD DPNNLAPNLN SYINGFSANV
RAIMERFKFS EQITHMAEKN ILFEVVKAFA KIDLSPQRVD QMQMGYVFEE LIRIGAEQSN
EEAGEHFTPR EVIKLMVNLL LAPEEDLAKS DVVKTIYDPA CGTGGMLSVA EEYIRHLNSD
ARPHLYGQDW NDEAWAVCKS DMLIKGEDAD NIILGDTFTR DGFDRDSDGN KWIFDYMLAN
PPFGVEWKQQ QKYIQKEADE LGYAGRFGAG TPRINDGALL FLQHMISKMR PVNKDGSRIG
IVFNGSPLFT GDAGSGESEI RRWIIENDWL EAIVALPEQL FYNTGIATYI WVITNRKAKE
RKGKVQLIDA RNFWVPMEKS LGNKRRRIGD PQDRPKDPNH IAEITRIYEN FQDGETRTFF
LDGKEKELVV SKLFDNDDFG YHKITVERPL RLNFQATAER IARLEEQTAF KNLASSNKKN
ETVRQQEIEA GRARQQEIRN LLADFADQHG DTLYKDRKLF LLALREVDRA RNIKLSAAEL
KAVIAALGER DETAEICKDK KGEPEADTDL RDTETVPLKE SIEEYFQREV LLHVPDAWID
YAKTKIGYEI PLNRHFYRYE EPRELTEIEA EIKGLESEIL ELLKEVTA
|
|---|
| |