Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_3995 |
Symbol | |
ID | 8119594 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | + |
Start bp | 4514007 |
End bp | 4514915 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644854374 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_003006274 |
Protein GI | 251791553 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTTTAC GCCACATCGA AGTCTTTCAG GCGATCGTTC AGGCCGGCAC CATCAGCGGC GCAGCACGGC TACTCAACGT TTCCCAGCCC AACGTCAGCC GGGTGCTGAA TCACGCCGAA CAGCAACTGG GGTTCGCCCT GTTCGAGCGG CGTTCGCAAG GGTTGGTGCC CACAGTGGAA GGGCAACGGC TGATGCCGGA GATAGAGCAG CTTTACCGCC AGTTGCAGGC GATTTCCCGC CTGACCGAGA ACATTCGCCA AGGCCAGTGC GAAACCATGC GGCTCGGTGC CGCCCACGCC TTCGGCCAGA TGATCGTCGC CCCGGCGATG GTGGAGTTTC AGCAGCAGGT GCCGCTCATG AACATCGAGC TGGTGACCGA GCACTTCAGC ACGCTATGCC AGAACATTCA GCAGCAGCAG CTCGACCTGG CGCTGGTGTT CGGCCAGCAG GTGCCGCCGG ATTTGCTGGC CGAACCGCTG TGCCAGTCGC GCATGGTGGC GATTCTACCG AAGGATAGCC CGCAACAGGG GCCGGTATCG CTGGAATGGT TGTGCCGCAA CAACCTGCTG ATGATGCAGC AGCAAGATCC GTTAGGCCAG GTGGTGCACC GTGCGCTGCG CGACCGTCGC CTCAAACCAG CGGCGTCGCT GTACATTAAG ACTTATTCGG TGATCGCCGA TATGGTGTTG GCAGGCGGCG GTACCGGCAT CGTCGACTTG TTTACCGCCC GCCGTTACGC CGACCAGCTC AAAATCGTGC CCATCAGCCA GCCATTGCCG TTCGAGGTGA TGCTGATAAG CCGCCGCGAT ATCCCGCAAT CCCGCGAGAT CCTGCAACTC AAGCAGGTGT TGAAAAGCAA ATGCCGCGAG CTTGCCAGCC AGTGCCAGCC GCTGCTGGAA GCGGCGTAA
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Protein sequence | MRLRHIEVFQ AIVQAGTISG AARLLNVSQP NVSRVLNHAE QQLGFALFER RSQGLVPTVE GQRLMPEIEQ LYRQLQAISR LTENIRQGQC ETMRLGAAHA FGQMIVAPAM VEFQQQVPLM NIELVTEHFS TLCQNIQQQQ LDLALVFGQQ VPPDLLAEPL CQSRMVAILP KDSPQQGPVS LEWLCRNNLL MMQQQDPLGQ VVHRALRDRR LKPAASLYIK TYSVIADMVL AGGGTGIVDL FTARRYADQL KIVPISQPLP FEVMLISRRD IPQSREILQL KQVLKSKCRE LASQCQPLLE AA
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