Gene Dd1591_3982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_3982 
Symbol 
ID8119581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp4500474 
End bp4501694 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content59% 
IMG OID644854361 
Productprotein of unknown function DUF214 
Protein accessionYP_003006261 
Protein GI251791540 
COG category[V] Defense mechanisms 
COG ID[COG0577] ABC-type antimicrobial peptide transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGTGAGG TGCGGTTTTC GGGTTATGGT CCCTCACTCC GACAGCAATT GACCGAGCCG 
CTGGATAGCC TGCGGATGCT TGGGCGTCGT GCTGTGCTGG CCTTGCTCGG TATTGTGGTT
GGCTGTGCAG CGGTTGTGGC CCTGATTAAC GTTGGTCACA ATGCTGAGGC CCAGGCTATG
GCGGTGTTCA GGAATATGGG GAGCGATCTG TTGGTGGCCA ACATTCAGCT TCCTGTCGGC
AATCAGATGC CACGCTACGC GCCCGATACG CTGGATACCA CGGTGTTGAA TGAAACGTTG
CCCGATATAT TGGCCGCGTC GGCGCTCAGC ATGACCTCGG TTGAGTCACG GTTACAGGGG
CGAATGTTCA ATACCGTGGT GGTGGGGATA AATCCTGCCA TCGCACGGGT GCTGGATCTG
CAAATGGCTC AGGGGCGTTT TCTGAGCCAG TTCGATGCCC GCAGCACCCA CGCGGTGCTT
GGCGCGAGTG TCGCCGCCGA ACTGCTCGCC AAAGGTATTC ATGTCACGCC CGGTGAAAGG
GTGCAATTGG GCGATTATCT GTTTCAGGTG GTGGGTATCT TGCAGTCCCG GGGACAAAAT
CCGATGGTGA CTGTATCGGT TGATGACAGC ATTCTGGTGC CGATAGAAAG TATGCGTCGT
ATTGTCCCCT CGCCACAAAT TAATACTTTT CTGGCGCGCA ACCGCAACAG CGAGACGCTG
GAACTTGTGG CGCCTCAATT GCAGAGCTGG CTCCAGGCTG TACTGCCTGG CCGGCAGGTC
GATGTGCAGA TCCCGCAGCA ATTGCTGGCA GGCATCGCAC AGCAATCACG CATGTTTTCC
TGGTTGCTTG CCGGTCTGGG CGGCATCTCT CTGTTGGTGG GCGGCGTTGG CGTGATGAAC
GTCATGTTAA TGAACGTTGC CGAGCGTCGG TGTGAAATTG GCGTGCGCAT GGCGCTGGGA
GCACGATCCC GGGATATTGC CAGCCTGTTC CTGCTGGAAG CGATCGCGCT GGCGGTGGTG
GGCGCGGTGG TGGGTGCAGG GGCGGGAATC GGTGCGGCCT GGTTATTCGT GCTCGTCTCC
GGCTGGACGA GCTTTTCGCT CTCACCGCTT TCGTTGTTGC TGGGGATAGG CAGTTCGGTG
CTTACCGGCC TGTTCTTTGG CCTGAATCCG GCGCTGTCGG CGGCGCGACT TCAACCTGTG
CAGGCATTAC GCGATGAATA A
 
Protein sequence
MREVRFSGYG PSLRQQLTEP LDSLRMLGRR AVLALLGIVV GCAAVVALIN VGHNAEAQAM 
AVFRNMGSDL LVANIQLPVG NQMPRYAPDT LDTTVLNETL PDILAASALS MTSVESRLQG
RMFNTVVVGI NPAIARVLDL QMAQGRFLSQ FDARSTHAVL GASVAAELLA KGIHVTPGER
VQLGDYLFQV VGILQSRGQN PMVTVSVDDS ILVPIESMRR IVPSPQINTF LARNRNSETL
ELVAPQLQSW LQAVLPGRQV DVQIPQQLLA GIAQQSRMFS WLLAGLGGIS LLVGGVGVMN
VMLMNVAERR CEIGVRMALG ARSRDIASLF LLEAIALAVV GAVVGAGAGI GAAWLFVLVS
GWTSFSLSPL SLLLGIGSSV LTGLFFGLNP ALSAARLQPV QALRDE