Gene Dd1591_3854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_3854 
Symbol 
ID8118807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp4352635 
End bp4353777 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content55% 
IMG OID644854221 
ProductEndonuclease/exonuclease/phosphatase 
Protein accessionYP_003006133 
Protein GI251791412 
COG category[R] General function prediction only 
COG ID[COG3568] Metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.676972 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTCA GACTTGCCAG CTATAACGTT GAAAACTTGT TTCACCGTAC TGCGATTCTT 
AACCTGCCTG ACCCGCAACA AAGCAGTGAA TTACTGGAGA AGGTTCGCCA GTTACAAACG
CTGCTGGATG ATGATAAGTA TGACGATGTC CTGAAAGACC GGGTTTTTAC CCTGACCAGC
AATCTCCAGC CGTATATCGA CTTGCGGGTT GACGGCGGCT CGCTGGGAAG CTGGAAAAAC
GAAGCGGGCA AGACCGGATT TCGGATTAAC AAGAGTTGCC GTGGGCGACG TGACTGGCTG
GGCGAGCTGG TTTTTCGTGC CGAACCCTTT GGCGATCAGC AGCGGCAAAA TACCGGGTTG
GTCATCAAGG CGCTGAAAGC CGATATTCTG TGCGCAGTCG AGGTGGAGAA TATGGCGGTG
CTGCGTGATT TCAATCAGCA GATTCTGGCG GATCACGCGT TTGCTCAGTA TGTCATGATC
GATAGCCCGA ACGATCCGCG CGGTATTGAT GTTGCCTGCC TCACTCGTCA TCGCATTACC
CAGTTGCGTA CCCATATTTT TGATGCGAGC GGGTCGTTTA CTCCGCTGTT CAGCCGCGAT
TGCCTGGAGG TGACGATAGA CGTCGGCCTG CCGCAGCCGG TGCATGTGCT GTGTAATCAC
TTCAAAAGCC AGAACGGCCG TAACGATGAA GAGCGCGAGC GGGCGGCCAA ACGTCGGCTC
GCTCAGGCGG AGCGCGTTGC CGAGATTGTG CGCGGGTACA ATTTGCAGCA GGAGTATGTC
GTGGTAATGG GGGATCTGAA CGAGGATGCC GCTAATCCCT GGCACAGCCT GACGCCGTTG
TTTTCCATAC CGGATTTACA CCCGGTGATT GATCCTAACC TGCCGGAAAC GGCGCGTTAT
ACCTATTATT TCTCCGGCGG AAAACCGCAG GAGCGATTAA ACCAACTGGA CTATATCTTC
ATATCTACGC CGCTACATCG CGCGAAGGTC ACCTGCGGCA TCGAACGACG CGGTATCTAT
AACATTGATA AGATCGCCGC TAAAGAGGGC GCAGAACCGG TGACGCCGTT CCCGACCGTC
ACTTCCTGGG ATACCGGCGC TTCGGATCAT GCCGCCGTGT GGGTGGAGTT GGATATTACC
TGA
 
Protein sequence
MKLRLASYNV ENLFHRTAIL NLPDPQQSSE LLEKVRQLQT LLDDDKYDDV LKDRVFTLTS 
NLQPYIDLRV DGGSLGSWKN EAGKTGFRIN KSCRGRRDWL GELVFRAEPF GDQQRQNTGL
VIKALKADIL CAVEVENMAV LRDFNQQILA DHAFAQYVMI DSPNDPRGID VACLTRHRIT
QLRTHIFDAS GSFTPLFSRD CLEVTIDVGL PQPVHVLCNH FKSQNGRNDE ERERAAKRRL
AQAERVAEIV RGYNLQQEYV VVMGDLNEDA ANPWHSLTPL FSIPDLHPVI DPNLPETARY
TYYFSGGKPQ ERLNQLDYIF ISTPLHRAKV TCGIERRGIY NIDKIAAKEG AEPVTPFPTV
TSWDTGASDH AAVWVELDIT