Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_3854 |
Symbol | |
ID | 8118807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | - |
Start bp | 4352635 |
End bp | 4353777 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644854221 |
Product | Endonuclease/exonuclease/phosphatase |
Protein accession | YP_003006133 |
Protein GI | 251791412 |
COG category | [R] General function prediction only |
COG ID | [COG3568] Metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.676972 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCTCA GACTTGCCAG CTATAACGTT GAAAACTTGT TTCACCGTAC TGCGATTCTT AACCTGCCTG ACCCGCAACA AAGCAGTGAA TTACTGGAGA AGGTTCGCCA GTTACAAACG CTGCTGGATG ATGATAAGTA TGACGATGTC CTGAAAGACC GGGTTTTTAC CCTGACCAGC AATCTCCAGC CGTATATCGA CTTGCGGGTT GACGGCGGCT CGCTGGGAAG CTGGAAAAAC GAAGCGGGCA AGACCGGATT TCGGATTAAC AAGAGTTGCC GTGGGCGACG TGACTGGCTG GGCGAGCTGG TTTTTCGTGC CGAACCCTTT GGCGATCAGC AGCGGCAAAA TACCGGGTTG GTCATCAAGG CGCTGAAAGC CGATATTCTG TGCGCAGTCG AGGTGGAGAA TATGGCGGTG CTGCGTGATT TCAATCAGCA GATTCTGGCG GATCACGCGT TTGCTCAGTA TGTCATGATC GATAGCCCGA ACGATCCGCG CGGTATTGAT GTTGCCTGCC TCACTCGTCA TCGCATTACC CAGTTGCGTA CCCATATTTT TGATGCGAGC GGGTCGTTTA CTCCGCTGTT CAGCCGCGAT TGCCTGGAGG TGACGATAGA CGTCGGCCTG CCGCAGCCGG TGCATGTGCT GTGTAATCAC TTCAAAAGCC AGAACGGCCG TAACGATGAA GAGCGCGAGC GGGCGGCCAA ACGTCGGCTC GCTCAGGCGG AGCGCGTTGC CGAGATTGTG CGCGGGTACA ATTTGCAGCA GGAGTATGTC GTGGTAATGG GGGATCTGAA CGAGGATGCC GCTAATCCCT GGCACAGCCT GACGCCGTTG TTTTCCATAC CGGATTTACA CCCGGTGATT GATCCTAACC TGCCGGAAAC GGCGCGTTAT ACCTATTATT TCTCCGGCGG AAAACCGCAG GAGCGATTAA ACCAACTGGA CTATATCTTC ATATCTACGC CGCTACATCG CGCGAAGGTC ACCTGCGGCA TCGAACGACG CGGTATCTAT AACATTGATA AGATCGCCGC TAAAGAGGGC GCAGAACCGG TGACGCCGTT CCCGACCGTC ACTTCCTGGG ATACCGGCGC TTCGGATCAT GCCGCCGTGT GGGTGGAGTT GGATATTACC TGA
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Protein sequence | MKLRLASYNV ENLFHRTAIL NLPDPQQSSE LLEKVRQLQT LLDDDKYDDV LKDRVFTLTS NLQPYIDLRV DGGSLGSWKN EAGKTGFRIN KSCRGRRDWL GELVFRAEPF GDQQRQNTGL VIKALKADIL CAVEVENMAV LRDFNQQILA DHAFAQYVMI DSPNDPRGID VACLTRHRIT QLRTHIFDAS GSFTPLFSRD CLEVTIDVGL PQPVHVLCNH FKSQNGRNDE ERERAAKRRL AQAERVAEIV RGYNLQQEYV VVMGDLNEDA ANPWHSLTPL FSIPDLHPVI DPNLPETARY TYYFSGGKPQ ERLNQLDYIF ISTPLHRAKV TCGIERRGIY NIDKIAAKEG AEPVTPFPTV TSWDTGASDH AAVWVELDIT
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