| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_3739 |
|---|
| Symbol | |
|---|
| ID | 8120738 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 4228349 |
|---|
| End bp | 4229689 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 644854108 |
|---|
| Product | Amidase |
|---|
| Protein accession | YP_003006020 |
|---|
| Protein GI | 251791299 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATTCAG AATATACCCT TGAGTCACTG TGCAGTGATT TACGTCGCGG TATAGTTTCA
GCCGCCGACA TTCGGCAGCA AGCGCTCAAT GCCGAAGCGC AACAGCGTCA TTTGAATTGC
TTTATCCGAA TTGATGATGC CGAAGAGCAA TTCGAAAAGG TGAAGGATGT TCATAAAGGC
GGGCCGCTGT ATGGTATCCC GGTTTCTTTT AAGGACAATA TTTGTGTTGC CGGGCTTCCG
GTTACGGTTG GTACACAAGG AATGGCGGAT TGTATCGCCA CTCATGACGC TGCTATCGTC
CGGAAACTGA AATCACTGGG CGCGGTTGTT GCCGGTAAGA ACAATATGAA TGAGCTGTGC
TTTGGCGTCA CATCTTGCGA GCCTTACTGG GGAGCGGTCG GGAACCCCTC TGCGCCCGGA
TATTCTATTG GCGGCAGCAG CAGCGGTTGT GCCGCCGCAG TGGCGGCCGG TATTGTGCCG
GTGGCGATCG GAACGGACAC CGGCGGTTCC GCAAGAATAC CGGCCTCTTT CTGCGGTATT
ACCGGTTTCA GGCCCACCAG CGGGCATTGG TCATCGTCCG GTATAATCCC TGTTTCTCAC
ACAAAAGATT CTCCTGGCCT GATTACCCGT ACGGCAAGTG ATGCCCATTT TTTATATACA
CATCTCTCCA GTGATGATGT CTCTCCCACA GAGCAAGGTC ATTTTCCCTG CCGGATAGGT
CTCCCGCTTT CTATGTGGTC CGAGCTGGAT GATGATGTTA TGACTCATTG CCGGTATGCT
ATTAACCAAC TGATTCTCGC TGGGTTTGAA TGTGTAGACG TGGATGATGC GGCGGTTTTT
TCTCTTAATC AAACAATAAC GTTTACGCTC CCGATTTATG AGTTTTTCAT CGATTTTCCT
CGCACGCTAT TATCTTTGGG ATGGGAAAAC AGGATTGCCA CAGTGTTTGA TAACATCAGT
GACAAAAATG TTCACAAGAT AATCCAGGAA CATTTGGTGG GCGGTCGTAT TTCTCCTGCT
GATTACGTCT CTGTGATCAG AAATATTGGC AGGTTGAGAC TGGATATGGA TACGCTGTTC
AGTACTTACG GCGTTGATAT GCTGGCATAT CCTACGGTTC CACGTCAGGT TCCACATCTG
AGCCAGACTG GGCGGCCGGA ATTGTTTGCT GAGCTTATTC GTAATACCGA TTTAGCCAGC
AATGCGGCGA TGCCTTCTAT TACACTTCCG GTTGCGCCAG AAGGCGCATT ACCTGTGGGG
CTTAGTTTTG ATGCCTTGCG TGGAAGAGAC CGCTATCTGC TAGGCATGGC CACCCGTATA
GAAACCATCA TAAAACCATA A
|
|---|
| Protein sequence | MYSEYTLESL CSDLRRGIVS AADIRQQALN AEAQQRHLNC FIRIDDAEEQ FEKVKDVHKG
GPLYGIPVSF KDNICVAGLP VTVGTQGMAD CIATHDAAIV RKLKSLGAVV AGKNNMNELC
FGVTSCEPYW GAVGNPSAPG YSIGGSSSGC AAAVAAGIVP VAIGTDTGGS ARIPASFCGI
TGFRPTSGHW SSSGIIPVSH TKDSPGLITR TASDAHFLYT HLSSDDVSPT EQGHFPCRIG
LPLSMWSELD DDVMTHCRYA INQLILAGFE CVDVDDAAVF SLNQTITFTL PIYEFFIDFP
RTLLSLGWEN RIATVFDNIS DKNVHKIIQE HLVGGRISPA DYVSVIRNIG RLRLDMDTLF
STYGVDMLAY PTVPRQVPHL SQTGRPELFA ELIRNTDLAS NAAMPSITLP VAPEGALPVG
LSFDALRGRD RYLLGMATRI ETIIKP
|
|---|
| |