Gene Dd1591_3181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_3181 
Symbol 
ID8121046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand+ 
Start bp3623199 
End bp3623642 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content61% 
IMG OID644853558 
Productcysteine desulfurase, sulfur acceptor subunit CsdE 
Protein accessionYP_003005482 
Protein GI251790761 
COG category[R] General function prediction only 
COG ID[COG2166] SufE protein probably involved in Fe-S center assembly 
TIGRFAM ID[TIGR03391] cysteine desulfurase, sulfur acceptor subunit CsdE 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.680141 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACCG ATTCTACACC GCACCCGTTT GGCACCGACA TCAATGAAGC GGCGCTGATA 
ACCCGCTTTG ACGCCTGCCG ATCTTGGGAA GAGCGCTACC GCCAGTTGAT TCTGCTAAGC 
AAATCCCTGC CGCCGCTACC GGAAGCCTAT CGTCAGCAGC AGATTGAACT GCCTGGTTGT 
GAAAACCGCG TCTGGCTGGG ATATCAACGG CAGGCGGACG GCTCGCTGCA TTTTTACGGC 
GACAGCGACG GCCGCATCGT GCGTGGGATG CTGGCGATTA TCTTGACGGC AGTAGAAGGT 
AAAACGCCAC CGGCGCTGCA ACAGAGCGAT CCGCTGGCGC TGTTCGAGCG GCTGGGGTTG 
CGCGCTGAAC TCAGCGCCTC ACGGGCCGGC GGGCTGGCCG CACTGGCCGG CCGTATCCAC 
GATATCGCCG GTCAGGAATC CTGA
 
Protein sequence
MTTDSTPHPF GTDINEAALI TRFDACRSWE ERYRQLILLS KSLPPLPEAY RQQQIELPGC 
ENRVWLGYQR QADGSLHFYG DSDGRIVRGM LAIILTAVEG KTPPALQQSD PLALFERLGL 
RAELSASRAG GLAALAGRIH DIAGQES