Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_2999 |
Symbol | |
ID | 8116976 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | + |
Start bp | 3410218 |
End bp | 3411063 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644853376 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_003005300 |
Protein GI | 251790579 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGCGAT CGCCTGCTGA AAACTCGTCA CACATGCCGC CGGCGCCTGA GCGCGCCGGA TTGGGTTTTC GTCTGCGCGC CGGCCTGACC TGGCTGGTGC TGCTCAGCCT GCTGCTGTGG CTGTTTTCGT TTATGGATCT GGATACCGGT CTGATCCGGC AAAAATTGCC GTCCATGTTG GGGATGCATC TCTCGCCGGA TGGTTTCATT CAGGGAGCGG TACTGAGCGT CGTCATCACG GTGATTTCCA TGCTGTTTTG CATCCTGCTG GCGGTCATCA CCGCGGCAGG CCGGCTCTCG TCCAGTGCCA TTGCATTCGG CTGCGCGACG TTTTACGTCT CATTGTTTCG CGGCACACCG CTGCTGGTGC AGGTGTTGAT CATCTACCTC GCGCTGCCGC AGGTCGGTAT CGTCATGAGC GCCTTTACGT CCGGTATCAT CGCGTTGTCG TTAAATTACG GCGCCTACCT GGCGGAAACT ATCCGCAGCG GCGTGCTCGC GGTGCCTCGT GGTCAGAAAG AGGCGGCGAT GGCGCTGGGA CTGTCACGCT GGGTCATTAC CACCCACGTG GTGGCGCCGC AGGCGCTGCG TATCATTATT CCGCCCGCCG GTTCGCAGTT CATTTCGATG ATCAAAGATT CGTCGCTGGT GTCGCTGATG GGGTTATGGG AACTGAACTT TCTGGCGCAG TCTTACGGCC GCAGTACCTA TCACTACATG GAAATGCTCA CCACCGCCGC GGTAATTTAT TGGTTGCTGT CCATCGGGTT GGAATTGCTG CAAGGCCGGC TGGAACGCCG TTTTGGCCGC GGCTACGAGC ACCACGAGAG TAAAATCTCG TCCTGA
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Protein sequence | MSRSPAENSS HMPPAPERAG LGFRLRAGLT WLVLLSLLLW LFSFMDLDTG LIRQKLPSML GMHLSPDGFI QGAVLSVVIT VISMLFCILL AVITAAGRLS SSAIAFGCAT FYVSLFRGTP LLVQVLIIYL ALPQVGIVMS AFTSGIIALS LNYGAYLAET IRSGVLAVPR GQKEAAMALG LSRWVITTHV VAPQALRIII PPAGSQFISM IKDSSLVSLM GLWELNFLAQ SYGRSTYHYM EMLTTAAVIY WLLSIGLELL QGRLERRFGR GYEHHESKIS S
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