| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2818 |
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| Symbol | |
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| ID | 8120514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 3201865 |
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| End bp | 3206904 |
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| Gene Length | 5040 bp |
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| Protein Length | 1679 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644853188 |
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| Product | YD repeat protein |
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| Protein accession | YP_003005120 |
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| Protein GI | 251790399 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAGA ATAAAAAAGC GACGCTGATA TCGAGCGAAG ACGCCGCCAA TCAAACCTTT
TCCACCGATA ACAAAATCTC CGGCGGGTGT GCCCAATGCG GCTGCGAAGT GCTGATTTAC
TACCATTACG ACTCGGGAAA ACCGGTGCCG AATGCGCCGT TTGTGTTGAC TGACAGCAAC
AAGACCGAGA TCCACGGCAA AACCGATGCC AACGGGCTGT GCCAAATCTA CGACATGGGC
TGCGGCACCT TCGAACTGAT GCTGGAGGAA GGCTCCGATG ATTTCACCCC CCGTGAAACC
GTAGAAAACA ACCCGGTATT ACAGTCGAAC CCGGCGTATG CCACGCTGGC GGGTGAGTAT
TTCACGCTGT TTCTATTGCT GCGCAAACAG GGCCTGGTGA ACTATGACGC CGACGACAGC
AGCGATCGCC ATGTCGATGT GGATGGCGCC GGGCTGTTTA CCTCTATCCC TCAAGAGTAC
CGCAAATCCT ATGACCGCTT CTGGGAGCTG GATAAACGGG TCAATCGCGG CGGCCGCGAG
CTGAAGCGGG CGGTCAATAA AATCCACCAC AGCCTGGCGG CGGAAGTGGC GGACAAAGGC
GGGGAGAGCA ACGCCGCGCT GATGCTGTTT TGTGAAATCG CGCTGGGGTT TATTCCGGTG
GTCGGGCAGG CCATGGATGT GTACGCGATA GGCGAGTGGA GCTGGCGGTC GTATCAAGAA
CCCGCCAGGC TGGAAGACCC GCTGCATATC GCCGAAGGCG CGCTCTGCGC CATTGGCGTG
ATCCCCGGAC TGGGGGATGC CTTGAAGGTC AGCGGACGGG CGATTATCCG TGCGCTCAAA
GAGGCCACCC CCAAAGAGCT GCAATTTGCC ATCAAAACTA TCCGCAGCCT GTCGGACGGT
AATCTGGTCA AAGGGCTGAC CCAATTGCAG GCCGAGCTGC GACATTACGG CGCGCAGGCC
AAAGATCTGT TGCTGAAAAT TCATGCGGCG CTCAAACAGG TACTGGCCGA GTCAGCGCTG
AAGAACAACT GGATCGTATC GATGATGAAA GACAGCTTCA GCGCCATGAT CACCGCGCTG
GAAAAGCTGA TTGCCAAATA TGACGGCGCG TTGGCCGACA TCGAATCCCA ATTCAAAGTA
TTCATCGACA AGGTGGTGAC CCGCGTCAGC GGGAGTGCGC GGAAGAAGGG CAGCATTGCC
CATGACGCCG CCGCGTCGAA AGCGCCGTCA CCGGCGGAAA GCCCGTCGGC CAAACCCGCC
GCGCAAAGCG AGAGCCCGCT CGCGGCGGGG GAGAAAACGG CTGGGATGCA GGCAGGCGGG
GGCAACAACG GAAAAGCGAC GTCGGCCAAA ACCGACGAAA AGAAAAACAC TCCCCCGGCG
GCAAAACCGA AAAACGCCGT CGGCAAGGAA AAAACACGTC AGTCATCGGA AGGGACGGAA
GACATCACCA CCGGGAGCAA CAAAGGCGAA CAGCCGGATA ATTCCCACCA ACAGGCGGCC
GCCGGGGAAA AAGATAAAAC GTGCAACGCC AACAGCAAAC ACTGCCAGAA TGAGGGCGAG
CCGGTGGATA TGGCGACCGG CTATGTGGTG GACTGGCGTA CCGATTTTAC GCAGAGCGGC
CTGCTGCCGC TGGCGATGAA ACGTTATTAC CGCTCGGGCG GCGAACGCCG GCCGGGCCTC
TTGGGGGCGC TGTGGCGCAG CAACTGGGAC ATGAGCCTGA CGCTGGACAA CGGTGTCGCC
ACGCTGACGG ACGGTGAGTT CAACCAGGCG GTCTTTGTCC TGCCCGAAGA GGGGGCGCAG
AGCCGGGCGC CGTCCAACCC GTCATGGCGG TTGTGCCGCC AGCAGGGGCA CCTGGTGTTG
CAGCACGTCG ACGGGCTGCG TTACCGCTTC GAGCACGCGT TGGGGCTGCA CCTGTGCCTG
ACCGCCATCG AAGACCGGGC GGGCCATCGC CTCACCTTCT TGTGGGACCG CGCCGACCTG
TGCTGGATTA GCCTGCCGGA CGGGCGTCTG GTCCACGTGG AAACGCAGCG GCGGCGGATA
ACCACACTGA CGCTGTGCGA CGAGCACCGC CAGCCGCTGA AAACGCTGGT CCGCTATCAG
TATGATGCAC AAGGCTACCT GCTGAACGTG CGGGCGGGGG AAGGGCGCAA TTTCGATTAT
CAGTACGCGC CGCAGGGCTG GCTGCTGCGC TGGTCGGATT TGGCGCACAC CTGGGTTGAG
CACGAGTACG ACGAACAGGG GCGCTCGCGG CGTGACCGCA CGGCAGACGG GTTCTGGCCG
GGCGAATTTC GTTACGACGA CGACGCCTTC ACCAGCCAGT ACCACAGCGG TTTTGGCGGC
GTCACCACCT ATGTGCGCGA TGCGCGCAAC AACATTCTGC TGCGCCGGGA GCCGGATGGC
GGGGAATACC GCTTCGAGTG GGTGGACAAC CAGCTGGCGG CGGAGAGTGA CCCGCTGGGC
GGGCGCACCG AATATCAGCG CAACGACTGG GGACAGGTGA CGGCGGTGAC CCTGCCGGAC
GGGGCGACGC ATCGCTATGA GTACGATGAT GACGGCCAGT TGCTGGCTTA TATCGACCCG
CTGGGCAGTG CGTGGCGTTA TACCCGCGAT GCGGCCGGGC GGGTGGACAC GGCGAGCGAC
CCGGAAGGGC GGACGTGGCA GCACCGCTAT TCGCCGCAGG GGTTGTTATC CGGCGTGACC
GGGCCGGACG GCCGGGTGCA GCGTTATCAC TACAACCGTC GCGGGCTGCT GGAGCGTCTG
GAGGCGGAAG GCACCTCGCC GGTGACCTTT TTCTACGACG GCCATGACCG GCTGACGGAG
CGGCATATTG CGCATGAACA GGGCGTGCAG GTGCGGCGGT GGGTGTACGA AGGCGGTCGT
GAGACGCCGG AGAAGGTGAT TTACGAAGAC GGCAGCGAAA CCCGGTTTGG TTACGACGGT
GAAGGGAACC TGACGTCGGT GACGGATGCG CTGGGCCAGC GTTACCAGTT CCGCTACGGC
GCGTTCGACA ACCTGCTGGA GGCGACGGAC CCGCTGGGGG CGAGCGTCCG CTATCATTAC
AATGCGGAGT CAGAATTCGC CGGGGTGACC AACAGTCAGG GGCAGACGTG GCAGTACCGG
TTTGACACGG CGGGCCGGCT CAGCGAGGAG CGGCATTACG ACGGCCGGGT GTACCGGTAT
GACTATGACG TGGCGGGGCA ACTGGCGAGC CGACAGGCCC CGGACGGCAG CCGACTGGCG
TACGGCTATG ACGCGGGCGG TCGGCTGAGG ACGATTGAGG CGGTCAGTGC GGACGGGGCC
GGCGAGGGGA CGACGACCTT TGCGTATGAC CTGTCGGGAC GGCTGCTGAA GGCGGCGAGC
CCGGACGCGG TGGTAGAGTA TGCGTACAAC CGCGCCGGAC AGGTGGTGAG CGAGACGGTC
AACGGCGAAG AGGTGCGCAC CGGCTACGAC GACGGCGGGC AGCGGTCAGT GGTGGAAGGG
CTGCTGGCGT CGCTGAGTCT GGGGTGGCAG GGCGGCCGGC TGACGACGCT GGGCATCGGT
TCGCACCTGC CGCTGACGTT CAGCCACACG GCGTCGGGGG AAGAGCAGCG GCGCAGCAAC
GGGTCGGGCT TCGCGCTGCG GCACGAGTGG AGTGCTGCGG GGCTGTTGTC GCGTCAGGCG
CTGGAAGGCG TGAGCGGGGT GCTGGAGCGG CGTTACCGGT ACGACGTACT GGACCGGCTG
ACGGGCCTCA GCGACAGTCA CTGGGGCGAG CAGGCGCTGC GGCTGAACGG GACGGGCCAG
GTGGTGGCGG AGCGTCGCGA GCAGGGTCGC CGGCAGCAGG CGCGGCTGTT TGGCTACGAC
AGCGAGCAGA ACCTGTGCGA GGTGTCGGCA ATCGAGCCGG ACGGGGCGGG CCGGCTGTCG
GCGAGCAATG CGGTGGTGCA GGCGTCATCG GGTTATGATA CGGCGGGCCG GGTGGTGATG
CGTGGCGACA GCCGGTATCA GTACGACGCC TGCGGCCGGC TGGTGAGCAA ACGGGAAAGC
CGCGCCGGTT TTCGGCCGCG GGACACGCAG TTCGGGTGGG ACGCGCAGGA CCGGCTGGTG
CGGGTGAGTC TGCCGGACGG GTCGCGGTGG CGGTATGGTT ACGATGCGTT CGGCCGCCGG
GTGAGCAAGG TGCGCGAGGG CCAGGGGCCG TCGGCGCAGG CGGTAGCGCG GGTGGCGTAC
CGGTGGGACG GCGACCAACT GTCGGGCCAG ACGCAGTACC GTGCGGACGG CAGCGTGGCG
CGGGCGGTGC AGTGGGTGTA CGAGCCGGGG AGTTTCCGGC CGCTGGCGCA GGTGGAAGAG
AAGGGCGGGC GCACGCAACT GCACTACATC GTGACGGACC TGACGGGAAC GGCGCGGGAG
CTGTGCAGCG AGACGGGGGA GGTACACTGG CGTGGCGAGC AGGCGTTGTG GGGCGCGCAC
CGTGAAGAGA AAATCCCCAT TCCGCTGCGG CGCTGGCTGG GTGATGCAGC GAACGAGGAG
GTGTATTGCG AGCTGCGTTA TCAGGGCCAG GTATACGATA GCGAGACGGG GCTGTATTAT
AACCGACACC GGTATTACGA CCCTGAGACA GCGCAGTACC TGTCGGGAGA CCCGCTGGGG
ATCGCAGGGG GGCTGAGGCC GCAGGGGTAT GTGCATAACC CGATGGAGTG GGTGGACCCG
TTTGGGTTGG TTGGGTGTCC AGTTAAGAAA TATGAGGTCA GTACTTATAA TGATCTGAAA
AATCGTTCGG TGAGTGGTGA TGAATTGGAT ATACACCACG CTATGCAGAA ACACCCTGCT
GGACAAGTTG TTCCTGGCTA CGATCCTAAA ACTGCTCCAT CTATTGCTAT TCCTAAGGTA
GAGCACCAAG AGATTCCAAC GATGAAAGGT CCATATACTG GATCAGCCAG AGATCTTTTA
GCAAAAGATG TTAAGGATCT TAGAGAATAT ACAAATGCTC CTGCTTCTTC TATAAAAGAA
CTGATCAAAC TTAATAAAGA AATGTTCCCT GACGCTTTTA AAAAGCTTCC TAGAAAATGA
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| Protein sequence | MSENKKATLI SSEDAANQTF STDNKISGGC AQCGCEVLIY YHYDSGKPVP NAPFVLTDSN
KTEIHGKTDA NGLCQIYDMG CGTFELMLEE GSDDFTPRET VENNPVLQSN PAYATLAGEY
FTLFLLLRKQ GLVNYDADDS SDRHVDVDGA GLFTSIPQEY RKSYDRFWEL DKRVNRGGRE
LKRAVNKIHH SLAAEVADKG GESNAALMLF CEIALGFIPV VGQAMDVYAI GEWSWRSYQE
PARLEDPLHI AEGALCAIGV IPGLGDALKV SGRAIIRALK EATPKELQFA IKTIRSLSDG
NLVKGLTQLQ AELRHYGAQA KDLLLKIHAA LKQVLAESAL KNNWIVSMMK DSFSAMITAL
EKLIAKYDGA LADIESQFKV FIDKVVTRVS GSARKKGSIA HDAAASKAPS PAESPSAKPA
AQSESPLAAG EKTAGMQAGG GNNGKATSAK TDEKKNTPPA AKPKNAVGKE KTRQSSEGTE
DITTGSNKGE QPDNSHQQAA AGEKDKTCNA NSKHCQNEGE PVDMATGYVV DWRTDFTQSG
LLPLAMKRYY RSGGERRPGL LGALWRSNWD MSLTLDNGVA TLTDGEFNQA VFVLPEEGAQ
SRAPSNPSWR LCRQQGHLVL QHVDGLRYRF EHALGLHLCL TAIEDRAGHR LTFLWDRADL
CWISLPDGRL VHVETQRRRI TTLTLCDEHR QPLKTLVRYQ YDAQGYLLNV RAGEGRNFDY
QYAPQGWLLR WSDLAHTWVE HEYDEQGRSR RDRTADGFWP GEFRYDDDAF TSQYHSGFGG
VTTYVRDARN NILLRREPDG GEYRFEWVDN QLAAESDPLG GRTEYQRNDW GQVTAVTLPD
GATHRYEYDD DGQLLAYIDP LGSAWRYTRD AAGRVDTASD PEGRTWQHRY SPQGLLSGVT
GPDGRVQRYH YNRRGLLERL EAEGTSPVTF FYDGHDRLTE RHIAHEQGVQ VRRWVYEGGR
ETPEKVIYED GSETRFGYDG EGNLTSVTDA LGQRYQFRYG AFDNLLEATD PLGASVRYHY
NAESEFAGVT NSQGQTWQYR FDTAGRLSEE RHYDGRVYRY DYDVAGQLAS RQAPDGSRLA
YGYDAGGRLR TIEAVSADGA GEGTTTFAYD LSGRLLKAAS PDAVVEYAYN RAGQVVSETV
NGEEVRTGYD DGGQRSVVEG LLASLSLGWQ GGRLTTLGIG SHLPLTFSHT ASGEEQRRSN
GSGFALRHEW SAAGLLSRQA LEGVSGVLER RYRYDVLDRL TGLSDSHWGE QALRLNGTGQ
VVAERREQGR RQQARLFGYD SEQNLCEVSA IEPDGAGRLS ASNAVVQASS GYDTAGRVVM
RGDSRYQYDA CGRLVSKRES RAGFRPRDTQ FGWDAQDRLV RVSLPDGSRW RYGYDAFGRR
VSKVREGQGP SAQAVARVAY RWDGDQLSGQ TQYRADGSVA RAVQWVYEPG SFRPLAQVEE
KGGRTQLHYI VTDLTGTARE LCSETGEVHW RGEQALWGAH REEKIPIPLR RWLGDAANEE
VYCELRYQGQ VYDSETGLYY NRHRYYDPET AQYLSGDPLG IAGGLRPQGY VHNPMEWVDP
FGLVGCPVKK YEVSTYNDLK NRSVSGDELD IHHAMQKHPA GQVVPGYDPK TAPSIAIPKV
EHQEIPTMKG PYTGSARDLL AKDVKDLREY TNAPASSIKE LIKLNKEMFP DAFKKLPRK
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