Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_2098 |
Symbol | |
ID | 8119575 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | - |
Start bp | 2412443 |
End bp | 2414281 |
Gene Length | 1839 bp |
Protein Length | 612 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644852484 |
Product | putative dehydrogenase large subunit protein |
Protein accession | YP_003004422 |
Protein GI | 251789701 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTCG TCACCCCTCA TCAGGCAGAG CAAACCGATT ACGATGTGGT GATTGTCGGC GGCGGTATCG CCGGTTCATT GATGGCCAAA ACACTGACCC GCGGCGGAAA ACGTTGTCTG ATACTGGAGG CCGGCGACGG AGACAATCTG CACTACGCCG GCTACCGGCA TACGCTACAG CATTATCTCC AGCGACCGGA TAAACGCCAT CAGGTCTCTG GGCCGCATAA CGTCAACGCA CCGACGCCTC ATGATACGGC ATGGCATTCG CTACAGTCTG ACGGCTATGA CGACGGCGGC TATCTGGTTC AACGCGGCCC GTTACCATTC AGCTCTACGT ATTGCCGACA ACTTGGCGGC ACATCGCTGC ACTGGCTCGG CAGCGCCATG CGTATGCTGC CGGAAGATTT TGAATTGCAA AGCCGCTATG GCATCGGCCT GGACTGGCCG TTGCGCTATG CGGATCTCGA ACCCTGGTAT CGGGCAGCCG AGTATGAGCT GGGCGTATCC GCCGACGTAG CAGAACAGGC CTATCTGGGC ATTCGTTTTC CGCCGGGTTA CGTCTATCCC ATGCAAGGGC TGCCGCCTGC CTGGGGCGCT CGCCAGTTGG CCCGTCGCCT CAGCGGGGCG TGTCTGGTTG AAGATGGCGA GTCGATTGCG CTATCCCTGC ACGGTACGCC GTCCGCCCGT AATGGCGTAC CGCATCCCGA TTATGACCAT GGCCGTGGTT ATCATCCTCA TGGCGCGGTT GGCGGTTCGC CGCTTGGGCG GCAATGTACC GGCAACAGCT ATTGCACGCC GTTCTGCCCG ACGCAAGCCC GTTACCATGC GCTGAAAACG CTGGAAGACG CCGCGCCTGA ACGGCTGGAT GTCCTCACCT GCAGCGTGGC GCATAAACTG CTGATCGACC CTGCGACAGA CGCCATCACC GGTATTCAGT TTCGTCATTA TGTTCATCAG GAGACAGCGT TACATCGCCT GCATACCGTT AGCGCCCGGC GCTATGTTCT GGCCGGCAAT GCGATCGCGA ATGCGGTTCT GCTGCTGGCG TCCGACGCCT GCAAAGGCAA TGACCTGGTA GGCCGCCATC TGATGGATCA TCCGGTCTTG CCGGTGTGGG GGCGAACCGA TACGCCATGG TGGCCGATGC GCGGCCCGCT CACGACATCG GGCATTGAAG TCATGCGGGG CGGCCCGGCC CGTGCGCAAC GGGCGGCCTA TCGCATCGAA CTGAGTAACG ATGGCTGGCG GTGGCCGGTC AACCGGCTTT ATCAGGATGT CGAACAGTTA CTGGCGGAGC CGCTGTGCGG TCCTCACCTG CGTAGACAGA TGCGCGAGCG GCTATCGCGG CAATGTAGCG CGCGCTGTAT GGTAGAACAG TTACCGGAAT ACAATAATCG GGTGACGATT CATCCGGATT ACCGGGATGC GCTGGGTAAT TACCGCCCGG TGATTCACTA CGATTTGTCG TTATATACCC GTGCCGGCGT CGCCCGCGCC GGCGCCGCCA TGCGACACAT TTTCCGGCAC GCCGGTATTC GTGATCACAG CCACTACTCA CGAGATGACC CCGGCTATTT TACCTATCAG GGGCAACCAC TGGCGTTTAC CGGAGCCGGA CACATCGCCG GCACCCATTG CATGGGAAAT TCCCCCCATC ATTCGGTCGT TGATCGCCAG CAACGTAGCT GGACTCATAA GAATCTCTAT TTAGTCGGCG CCGGAAATAT GGTGAGCATG GGCACAGCGC CGCCCACGCT GACGCTGGCG GCGTTGACGT TATGGGCAGC GCACACAATT CTTTCCGAAC TGGACAGAAT GTGTGCCAGA ACACGTTAA
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Protein sequence | MNFVTPHQAE QTDYDVVIVG GGIAGSLMAK TLTRGGKRCL ILEAGDGDNL HYAGYRHTLQ HYLQRPDKRH QVSGPHNVNA PTPHDTAWHS LQSDGYDDGG YLVQRGPLPF SSTYCRQLGG TSLHWLGSAM RMLPEDFELQ SRYGIGLDWP LRYADLEPWY RAAEYELGVS ADVAEQAYLG IRFPPGYVYP MQGLPPAWGA RQLARRLSGA CLVEDGESIA LSLHGTPSAR NGVPHPDYDH GRGYHPHGAV GGSPLGRQCT GNSYCTPFCP TQARYHALKT LEDAAPERLD VLTCSVAHKL LIDPATDAIT GIQFRHYVHQ ETALHRLHTV SARRYVLAGN AIANAVLLLA SDACKGNDLV GRHLMDHPVL PVWGRTDTPW WPMRGPLTTS GIEVMRGGPA RAQRAAYRIE LSNDGWRWPV NRLYQDVEQL LAEPLCGPHL RRQMRERLSR QCSARCMVEQ LPEYNNRVTI HPDYRDALGN YRPVIHYDLS LYTRAGVARA GAAMRHIFRH AGIRDHSHYS RDDPGYFTYQ GQPLAFTGAG HIAGTHCMGN SPHHSVVDRQ QRSWTHKNLY LVGAGNMVSM GTAPPTLTLA ALTLWAAHTI LSELDRMCAR TR
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