| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2054 |
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| Symbol | |
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| ID | 8119531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | + |
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| Start bp | 2364979 |
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| End bp | 2365770 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644852441 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_003004379 |
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| Protein GI | 251789658 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGAT GCAGGGTTGC CAGACCGCTG CTGCTGGCGC TGATGATGGT CTTTGCCGAC
CGTGCGCTGG CGCAGTCGGC GCAGCAAGAA CCGGTGCGCG TGCAACTGAG CGCAGTGCGC
CAGACCACGC TTTCCAGCGG TATTACGGCA CGCATCACCC ATCTGGCCGT CAAAGAGGGC
GACCGCGTTA AGCAGGGGCA GGTACTGCTG AGTTTTGACT GTGCGGTGCT AAAAGAGAAA
CTGAATTACG CCAGCGCCAA CGAACAGGCG GCACGCAAAA AGCTGGAGAT CGCCAACCGT
CTCGACAAGC TGAACTCGAT CAGTGTTTCT GATGTGGAAC AGGCGCGTTC GGCAGTGAGC
ATGGCGCTGG CCGAAAGCGG CGTAAACCGC GCCATGCTGG AGCGCTGCGA CATCAAAGCG
CCGTTTTCCG GGCGCGTTAC CGAAACGCTG GTGCGTAACT GGGAAACGGT GCCGGAAGGC
AAGCCGTTGT TGTCGCTTTA CGACGACAGC GCCTTTGAAC TGGAGATGAT TGTGCCGTCG
CGCTGGCTGC GTTGGTTGCG TGCCGATACG CCGTTTAGCG TGGCGCTGGA TGAAACCGGA
CAACGCTACC CGGCGAAAAT CTCCCGCCTT TCTTCATCGG TCGATGCGGT GAGCCAGTCG
GTTAAAGTGT TTGGGCAAAT TGCCGGTCAC GACGACGGCT TGTTGCCGGG GATGAGCGGC
GTGGCGCATT TCAGCGCGCC GGCGGCAGCG GACACCCCCC TTCAGGACGA CGCGGTTAAC
CATGCACAGT AA
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| Protein sequence | MKRCRVARPL LLALMMVFAD RALAQSAQQE PVRVQLSAVR QTTLSSGITA RITHLAVKEG
DRVKQGQVLL SFDCAVLKEK LNYASANEQA ARKKLEIANR LDKLNSISVS DVEQARSAVS
MALAESGVNR AMLERCDIKA PFSGRVTETL VRNWETVPEG KPLLSLYDDS AFELEMIVPS
RWLRWLRADT PFSVALDETG QRYPAKISRL SSSVDAVSQS VKVFGQIAGH DDGLLPGMSG
VAHFSAPAAA DTPLQDDAVN HAQ
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