Gene Dd1591_2044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_2044 
Symbol 
ID8119521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp2347382 
End bp2348587 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content64% 
IMG OID644852431 
Productresponse regulator receiver protein 
Protein accessionYP_003004369 
Protein GI251789648 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4963] Flp pilus assembly protein, ATPase CpaE 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.274196 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGACG CAACGGTATC TCCGGCTCAG GAAGCGGAAG AGTGGAGCGC GGGGCTGGCG 
GCGTTTGTGC AAGACGCCGG TCAGCAAACG CAGCTGCGTG AAGACCTGGC TCGCCTGCGA
CGCCCGGGGG TGCAGGTCCA TGCCGGCGGT TTGGCCGCCG CCAGACAATG GTGTGAGCTG
AACCTGCCGC CGCAGATCTT GCTGATTGAT CTCGACGGCG AGCCGTGGCC GCTGCCGGAG
ATGGAAACGC TGCTGGCGAT GTGCGGCCCC GGCACGCGGG TGATCGCCCT CGGCAAAACA
CAGGACGTTG ATTTGTACCG TGCGCTGTTG CAGTTGGGCG TGACGGATTA TCTGGTCAAG
CCCTGCACGC TGGATTTGCT CTCTGCCACG CTGGCGAAGT GTGATGGACA ACAGTCCGGC
CCGGAGTACG CGCGGATGGG GCGTACCGTG GCGGTGGTCG GCGCCAGCGG CGGCGTGGGC
GCCAGCACCG TGGCGGCAAG TCTGGCGCGG CTGATGTCTC TGGAACGCCA TCTGCCCGTC
GCGTTGGTGG ATTTCGACCG TCGGCATGGC GATCAACTGC TGTTGCAAGG AATGGATGAC
GACGCCGGGC TGACGGCGGT GTTGGACAGC GAACAACTGG ATACCCGGTT GTTGCAACGC
GCCATGTTGC AGGTGGATAC CCGCCTGCAT TTGCTGGCGC AGAAGCCGCA ACTGGGCGAA
TTGCCGGATG TCGATCCCGA TGCGGTGCTG AATCTGGGCG GTACTTTGTG CCGCATGTTT
AACCAGGTGA TATGGGATTT GCCGGGCTAT CTGCCCACCG GCGCGTTGGA TGTGATCAGT
TGCGCCGATC TGCGCATTCT GGTCACCGAA CTGACGGTGC AGGATGCGCG TAACGTGCGT
CGCCTGGTGC AGGCGATTGG CGATGAAAGC GAAGGTCAAC GCTTGTTGCT GGTGCATAAC
CAGAGCCACT TCAGCGGCAA TGCGCCGTTA AGCCGCGCGC AATTCGAAAG CTTGATCGAA
CGACCGCTGG ATGTGGTGTT GCCGCACGCC GGCGCCGCGT TGGGGCAAAG CCTCAGCCTC
GGCGCGCTGG ATCTGGCCGC CAGCGCGCCG TTCCGGCAGG GGATGCGCCA ACTGGTGGAT
AGCGCTTGCG GCGTGCGGCC GACGCCGGCG AAAAAGCGTT GGCTGAGTTT GTTAAAGCGT
GCCTGA
 
Protein sequence
MSDATVSPAQ EAEEWSAGLA AFVQDAGQQT QLREDLARLR RPGVQVHAGG LAAARQWCEL 
NLPPQILLID LDGEPWPLPE METLLAMCGP GTRVIALGKT QDVDLYRALL QLGVTDYLVK
PCTLDLLSAT LAKCDGQQSG PEYARMGRTV AVVGASGGVG ASTVAASLAR LMSLERHLPV
ALVDFDRRHG DQLLLQGMDD DAGLTAVLDS EQLDTRLLQR AMLQVDTRLH LLAQKPQLGE
LPDVDPDAVL NLGGTLCRMF NQVIWDLPGY LPTGALDVIS CADLRILVTE LTVQDARNVR
RLVQAIGDES EGQRLLLVHN QSHFSGNAPL SRAQFESLIE RPLDVVLPHA GAALGQSLSL
GALDLAASAP FRQGMRQLVD SACGVRPTPA KKRWLSLLKR A