| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2041 |
|---|
| Symbol | |
|---|
| ID | 8119518 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 2344261 |
|---|
| End bp | 2345187 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644852428 |
|---|
| Product | Flp pilus assembly protein CpaB |
|---|
| Protein accession | YP_003004366 |
|---|
| Protein GI | 251789645 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3745] Flp pilus assembly protein CpaB |
|---|
| TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.106466 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAA ACTCGACGCT TTTATTGTCC GTGGCGCTGA TTGCCGCCGG GGTCATGGCG
CTGATTGTTC GCAGCCAACT CCCGGGCACG CCTGCTGCAC AGCAGACGCC GGCACCGGCA
CCGATACCCG TGGAGAAAAC GGCGGTGCTG GTGACCGCGC GGGATCTCTC GCCAGGCGAT
TTTATTGATG GTTCCGCCGT GCGCTGGCAG GAAACGGACC AACCGGTTTC ACGAACCTTC
TATTTTATTC GTGGTAAAGA TCAGGAAAGT CAGTTATATG GCGCGACGCT ACGGGGGAAA
ATCCCGGCGG GCACCCCGTT AAACAATAAC AGCGTGGTTC GCCCCAATGA GCCGGGCTTT
ATTGCCGCCG TACTCCGTCC GGGGATGCGC GCCATCTCCA TTCCTACCAG CGTGGTCGCC
AGCAATGCAG GTCTGGTCAG CGCCGGCGAT TATGTCGATA TCATCCTCAG CCTGCGCCGT
GATGATGAAG TTGCGCTGCA ACCCACGTCT CAACAGCCTG TCCCTCCGCC GGTGGTCGGC
GCGCAGACCG TAGCGCGCAA TCTGCGGGTT CTGGCGCTGA ATAATCAAAC GGATGCGATT
ACCTCTATGC GTCCGCGTCA GGATATCAAC GGCGCTGAAC CGGCACAGAA TACTCCGCAG
GGACGCCAGC GTACGCCTAT TTATCAGTCC ATCACGCTGG AAGCGACGCC CAAACAGGCG
GAAGTGCTGA CCGTCGCCAA AGAAGTGGGG CTGTTGCAGA TGGCGCAGCG CAGCGCGCTT
GACACATCCG ATGACGCCGA GGCGCAAACA ACGGTGACCA CCCTGAAAGA TACCACCGGT
ATTTACAGCA AGATGGTCAG CAGTGGACAT CAGGTGAAAA TGTTCCGTGG CGACAGGGCC
GAGGTAAAGC AATTCCCTGC CCGATGA
|
|---|
| Protein sequence | MKINSTLLLS VALIAAGVMA LIVRSQLPGT PAAQQTPAPA PIPVEKTAVL VTARDLSPGD
FIDGSAVRWQ ETDQPVSRTF YFIRGKDQES QLYGATLRGK IPAGTPLNNN SVVRPNEPGF
IAAVLRPGMR AISIPTSVVA SNAGLVSAGD YVDIILSLRR DDEVALQPTS QQPVPPPVVG
AQTVARNLRV LALNNQTDAI TSMRPRQDIN GAEPAQNTPQ GRQRTPIYQS ITLEATPKQA
EVLTVAKEVG LLQMAQRSAL DTSDDAEAQT TVTTLKDTTG IYSKMVSSGH QVKMFRGDRA
EVKQFPAR
|
|---|
| |