Gene Dd1591_2040 details

Gene Information

• Locus tag: Dd1591_2040
• ID: 8119517
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya zeae Ech1591
• Kingdom: Bacteria
• Replicon accession: NC_012912
• Strand: +
• Start bp: 2343670
• End bp: 2344227
• Gene Length: 558 bp
• Protein Length: 185 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 644852427
• Product: peptidase A24A prepilin type IV
• Protein accession: YP_003004365
• Protein GI: 251789644
• COG category: [O] Posttranslational modification, protein turnover, chaperones; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG4960] Flp pilus assembly protein, protease CpaA

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.0329239
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCGGGC AGTTTGGCGT GCAGTCTGCG TATAACCTAT TGCTGGTGGT GTGTCTGGTC 
TGGTGCATCG GCAGCGACCT GTTGCTAAGA CGTATCCCGA ATCGTGCGGT ATTGGCGCTG 
TTGCTGGGCT GGCTGGCGTT GAGCGCGTTG GCGACAGCCG GGGTGACGGG GCCGTTGCCG 
CGTCTTTCCG GCTCCTTGTT GCAGGCATTG CCGGGGGCGC TGCTGGTGTT TGTGGTGGGA 
TTTCTGCTGT TTCTCACCGG GCGGCTGGGA GCCGGCGACG TCAAACTGAT GAGCGTGCTC 
TGTTTGTGGG TGGGTTACGG CCACCAGATC AGTTTTGTCA TGGTGACGGC TATTGCCGGC 
GGGATACTGG CATTATCGCT GCCGTTGCTC AATACCTGCT CGACAGGCGT GGCATTGCTG 
ATTGAACGGA TGAATCACCT GCTGAAAATA AATATTACGC CGCCGCCAAT GCTCTCTGCT 
GAATTATCAC AGGGTATTCC CTATGGCATC GCTATTGCCT TTGGGGCGGC TTATATCCTT 
ATTTGGCCTC AGTTCTGA 

 

Protein sequence

MAGQFGVQSA YNLLLVVCLV WCIGSDLLLR RIPNRAVLAL LLGWLALSAL ATAGVTGPLP 
RLSGSLLQAL PGALLVFVVG FLLFLTGRLG AGDVKLMSVL CLWVGYGHQI SFVMVTAIAG 
GILALSLPLL NTCSTGVALL IERMNHLLKI NITPPPMLSA ELSQGIPYGI AIAFGAAYIL 
IWPQF