Gene Dd1591_2031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_2031 
Symbol 
ID8119508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand- 
Start bp2334297 
End bp2334917 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content57% 
IMG OID644852418 
ProductTPR repeat-containing protein 
Protein accessionYP_003004356 
Protein GI251789635 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3063] Tfp pilus assembly protein PilF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATCC TGTACACACT TGTCCTTACC GCCGCCGTCC CCTTTTCAGC GCTGGCGAAC 
CTCTCGCTGG AGAATTTGCA GCAAAGCTGG TCCATCTGCC AGTACCAGAC GCTGGAATCC 
GCGAAAGAGC GCTGCTTCAG CACGCTCAGC CAGCAGGCGC ATGACGCAAG CCAGGCGAGC 
AACAATGCCG ATGCGCCGCT GCTCATCTGG TCGGCGATTA TCGACAGCAG TTGGGCGGGC 
GCTAAAGGCG GCCTGGGTGC GCTGAGCCTC GTCAAACAGG CGCGCGATAA CCTGGAAAAG 
GCCATTGGCA TCGATCCGAA CGCGTTACAA GGGTCGGCCT GGACCAGTCT TGGCGCGCTG 
TATTATCAAG TCCCCGGCTG GCCGATTGGT TTTGGCGATA AAGAAAAAGC GGAACAAATG 
TTGAAAAAGG CCCTGGCGCT CAATCCCGAG GGGATTGATC CCAACTACTT TTATGGTGAC 
TTTCTGCTGA AAGAGAAAAA AACCGACGAA GCGAAACGCT ATCTGGAAAA AGCGCTTAAA 
GCACCCGCCC GCCCCGGACG TGACATTGCC GACAGCGGGC GTCGCCGCGA TATCGCCAAG 
GATCTGGCAA GCCTCCAGTA A
 
Protein sequence
MKILYTLVLT AAVPFSALAN LSLENLQQSW SICQYQTLES AKERCFSTLS QQAHDASQAS 
NNADAPLLIW SAIIDSSWAG AKGGLGALSL VKQARDNLEK AIGIDPNALQ GSAWTSLGAL 
YYQVPGWPIG FGDKEKAEQM LKKALALNPE GIDPNYFYGD FLLKEKKTDE AKRYLEKALK 
APARPGRDIA DSGRRRDIAK DLASLQ