| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1907 |
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| Symbol | |
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| ID | 8119384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | + |
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| Start bp | 2174610 |
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| End bp | 2176685 |
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| Gene Length | 2076 bp |
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| Protein Length | 691 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644852298 |
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| Product | type III secretion outer membrane pore, YscC/HrcC family |
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| Protein accession | YP_003004236 |
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| Protein GI | 251789515 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02516] type III secretion outer membrane pore, YscC/HrcC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGTAACG CGCTGTATGC ACTATTGTTT AACCTTTACC GCCTGTTTTG CTGGTCGCTG
GTGCTGATGG GGATGTTGCC TATCGCCCAT GCGGCGACGC CGGCTGATTG GAGCAAAGGC
GCTTATGCCT ATTCCGCCGA ACAGACGCCG CTATCGGCGG TGCTGCAGGA TTTTGCCAAT
GGTCATGGTG TCGATCTGGT GTTGGGCAAC ATTGAAGACG TCAATATCGA GACAAAAATC
CGCGCCGACA ACGCCGTTGC GTTTCTCGAC CGGTTAGCGT TGGAGCACCG TTTTCAGTGG
TTCGTCTACA ACAACGTGTT ATACGTCAGT CCGCAGGATG AACAGACCTC GGTACGTATC
GAGGTATCGC AAGACGCCGC GCCGGACATG AAACAGGCAT TGACCGGCAT CGGTTTGCTG
GATTCCCGCT TCGGCTGGGG GGAATTGCCG GAAGAAGGCG TGGTGCTGGT CACCGGCCCG
ACCGAATACA TCAATTTGAT CCGTAATTTC AGTCAGCAGC GTGAAACCAA AGAAGATCGT
CGCAAGGTGA TGATCTTTCC ATTGCGTTAC GCCTCGGTAT CGGACCGCAC TATCCAGTAT
CGCGATCAGC GCCTGGTGAT CCCCGGCGTG GCGACCATTC TGAATGAATT AATGGATGGC
AACCGCAACA CGCCCGCTGG TGCCGCGGCC GCGGGCAGCG GTATCGGCAG CGACGGCGGA
ATGACGACGG CCGACGGCGC GGGCGGTGGG CAGGATGCCA GTAAGGCGAT TGAAATGAAC
GCCCGCTCGA TGCTGGCCAA GTTGGCGAGC CGTAACAGCG GCGGCGCCTC TTCGGCGTCC
CGTAAAAAAG ATCAGCTCAA CGGCAAGGTA TCGGCGGATG TGCGCAACAA CGCACTGTTG
GTGCGCGACG ATGAAAAACG TCGGGATGAA TACCAGCAAC TGATCGACAA GATCGACGTG
CCGCAAAATC TGGTCAACAT CGATGCGATC ATTCTGGATG TGGACCGCAC AGCGCTTTCC
AGGCTGGAAG CCAACTGGCA AGGGAAACTG GGTGCCGTTA CCGGCGGTGC CAACATGATG
TCAGGTTCCA GCACGCTGTT TGTCAGCGAT TTCAAACGTT TTTCCGCTGA TATTCAGGCG
CTGGAAGGCG AGGGCACCGC ATCTATCGTC GCCAATCCAT CGGTACTGAC GTTGGAAAAC
CAGCCCGCGG TGATCGATTT CAGCCGTACC GCCTTTATTA CCGCCACCGG CGAGCGTGTG
GCGAATGTGC AGCCGGTGAC CGCCGGCACC AGCCTGCAGG TGACGCCGCG GGTCGTCGGC
CACGGCGGCT CGAGCAGTAT CCAACTGGTT ATCGACATTG AAGACGGTCA GGTGGAAACC
AATACCGAAG GCACCGCTTC CGGTGTGAAA CGCGGTACGG TCAGTACGCA GGCGCTGATT
GGCGAAAACC GGGCGTTGGT GTTGGGGGGA TTTCACGTCG AAGAGAGCGG TGATCGCGAT
AAGCGTGTGC CGTTGCTCGG CGACATCCCC TGGATCGGCA AACTGTTCAC CTCACGCCAG
CATGAAGTCT CCCGCCGCGA ACGGTTGTTT ATTCTCACGC CGCACTTAAT TGGCGATCAG
AACGATCCCA CCCGGTTTGT CTCGGCGGAT AACCGTCGTC AACTGAATGA CGCTATGGGG
CGAGTGGCCC AGCGCAACAG CAAAACCGAT CTGTTCGGCA CAGTAGAAAA TGCCCTGCGC
GATCTGGCCA GCGGCCAGAC GCCGGCCGGT TTCACCATTG ACGGCAGCGG GCCGACATTG
TCGGAGATTT GTCGCACATC GCCATCAATG AGTTATCAGA GTCATCGTCA CCAGTGGTAC
AGCAATTTGT CTCTCAGCCT GACGGTCGGG GTGGTGAAAA ACACCGGTAC TCAGCCCCTG
CGCTTTGACG AAGCCAGCTG TGCCAATAGC CGTACGCTGG CGGTCGCCGC CTGGCCGAAA
ACCACGCTGG CACCCGGTGA ATCCACCGAG GTGTATCTGG CGCTGTTGCC GGCCAAAAAC
GCGCAACCGT CTCGCGCATC CTTAATCAAA CCCTGA
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| Protein sequence | MCNALYALLF NLYRLFCWSL VLMGMLPIAH AATPADWSKG AYAYSAEQTP LSAVLQDFAN
GHGVDLVLGN IEDVNIETKI RADNAVAFLD RLALEHRFQW FVYNNVLYVS PQDEQTSVRI
EVSQDAAPDM KQALTGIGLL DSRFGWGELP EEGVVLVTGP TEYINLIRNF SQQRETKEDR
RKVMIFPLRY ASVSDRTIQY RDQRLVIPGV ATILNELMDG NRNTPAGAAA AGSGIGSDGG
MTTADGAGGG QDASKAIEMN ARSMLAKLAS RNSGGASSAS RKKDQLNGKV SADVRNNALL
VRDDEKRRDE YQQLIDKIDV PQNLVNIDAI ILDVDRTALS RLEANWQGKL GAVTGGANMM
SGSSTLFVSD FKRFSADIQA LEGEGTASIV ANPSVLTLEN QPAVIDFSRT AFITATGERV
ANVQPVTAGT SLQVTPRVVG HGGSSSIQLV IDIEDGQVET NTEGTASGVK RGTVSTQALI
GENRALVLGG FHVEESGDRD KRVPLLGDIP WIGKLFTSRQ HEVSRRERLF ILTPHLIGDQ
NDPTRFVSAD NRRQLNDAMG RVAQRNSKTD LFGTVENALR DLASGQTPAG FTIDGSGPTL
SEICRTSPSM SYQSHRHQWY SNLSLSLTVG VVKNTGTQPL RFDEASCANS RTLAVAAWPK
TTLAPGESTE VYLALLPAKN AQPSRASLIK P
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