| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1891 |
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| Symbol | |
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| ID | 8119368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 2158646 |
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| End bp | 2160748 |
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| Gene Length | 2103 bp |
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| Protein Length | 700 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644852282 |
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| Product | type III secretion protein, HrcV family |
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| Protein accession | YP_003004220 |
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| Protein GI | 251789499 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4789] Type III secretory pathway, component EscV |
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| TIGRFAM ID | [TIGR01399] type III secretion protein, HrcV family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTATCC TGATCGTCTG GCTTAACCGT TTTGCCATTA GCGCCATGCA GCGCTCCGAG
GTGGTGGGCG CCGTGATCGT CATGGCGATT GTGTTCATGA TGATCATCCC GCTGCCGACC
GGTCTGATCG ACGTGCTGAT TGCGTTCAAC ATCTGTATTT CATCACTGTT GATTGTGCTG
GCCATGTACC TGCCCAAGCC GCTGGCGTTC TCTACATTTC CGGCGGTATT ACTGCTGACC
ACCATGTTTC GGCTGGCGTT GTCCATCTCC ACCACCCGAC AGATCCTGCT GCAACAGGAT
GCCGGTCACG TGGTGGAGGC GTTCGGCAAC TTCGTGGTAG GCGGCAATCT GGCGGTGGGG
CTGGTGATAT TCATGATCCT GACGGTGGTG AACTTTCTGG TCATCACCAA AGGGTCGGAA
CGTGTGGCGG AAGTGGCGGC ACGCTTCACG CTGGATGCGA TGCCCGGCAA GCAAATGTCC
ATCGACAGCG ACTTGCGCGC GGGGTTGATA GACTCGCAAC AGGCACGCCA GCGCCGGGAA
AACCTGGCCA AGGAGAGCCA GTTATTCGGG GCGATGGACG GGGCGATGAA GTTCGTTAAA
GGGGACGCCA TCGCCAGTCT GGTGATCGTA TTTATTAATA TGATCGGCGG TTTCGCCATC
GGCGTGCTGC AAAACGGTAT GGCCGCCGGC GACGCCATGC ACATTTATTC GGTGCTGACT
ATCGGCGACG GTTTGATTGC CCAGATCCCG GCGCTGCTGA TTTCACTGAC CGCCGGGATG
ATCATTACCC GTGTGTCGGC AGACGGCCAG AAAACGGACA ACAATATCGG CCGGGAAATA
GCCGAGCAGC TGACCAGCCA GCCCAAAGCA TGGATTATCT CATCAGTAGG GATGTTGGGG
TTTGCGCTGT TGCCCGGTAT GCCGACGCTG GTGTTTCTGC TCATTAGCCT GGCATCGCTC
GGCAGCGGGT TATTCCAGCT CTGGCGCGCC AAACAAAGCG GATTACAAGA TGCGCTGCTG
GCGGACGACG GCCTGCCTGC CGACCAGAAC GGCTATCAGG ACTTACGACG CTTTAATCCC
ACCCGCGCCT ACCTGTTGCA GTTCCATACC GTGTGGCAAG GCGCCGCCGC CGCCGCTTTA
CTGGTGCAGG AGATCCGCCG TCTGCGCAAC CGGCTGGTGT ATCACTTTGG TTTTACGCTG
CCGTCGTTCG ACATCGAATT TACCCCCAAC GTACCGGAAG ATGAGTTTCG TTTCTGCGTG
TATGAAATTC CGCAATTGCG GGCCAGTTTC GGCGTGCCGC TGCTGGCGGT GCCGCGCGGG
CAAATGCCGG AAGACGCGCT CGACGACGGC ATGATGCTGG GGCTCGCCAC CCGCGATGAG
CATCACCTGT TATGGCTGAC GCCGGAACAC CCGATGCTAC AGCAGCCGGA ACTGAGCCCC
TGGAGCCCGG ATGCGCTGAT CCTGAGCCGC ATGGAGAATG CGATTCATCG CAGCGGCGCG
CAATTCATCG GGTTGCAGGA AACCAAGTCG ATCCTCGCCT GGCTGGAAAG CGAACAACCG
GAACTGGCGC AGGAACTCCA GCGCATTATG CCGTTGTCGC GCTTTGCCAG CGTGTTGCAA
CGGCTGGCAT CGGAACGGGT GCCGCTGCGC TCGGTACGGC CGATTGCGGA GGCGCTGATC
GATATCGGCC AGCATGAACG CGACATCAAC GCCCTTACCG ACTACGTCCG TCTGGAACTG
AAAGCGCAGA TTTGCCACCA GTACAGTCAG GACGACAGCC TCACCGTCTG GCTGCTGACG
CCGGAAACGG AAGAACTGCT GCGCGATGCG CTGCGCCAGA CACAAAACGA AACCTTCTTC
GCGCTCACCC AGGAATACGC CGCCACCCTG CTTGGTCAGT TACGGCGCGC CTTCCCGCCG
ATGATGGCGC CGTCGTCGCT GATTCTGGTG GCGCAAGACC TGCGTAGCCC GCTGCGCATT
CTGTTGCAGG ATGAATTTCA TCATGTACCG GTGCTGTCAT TTACCGAACT GGAATCGCAC
CTGTCGATCA ACGTAGCGGG CCGTATCGAC CTGCTGGACA GGATTGACCC TTTTAACGCA
TAG
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| Protein sequence | MAILIVWLNR FAISAMQRSE VVGAVIVMAI VFMMIIPLPT GLIDVLIAFN ICISSLLIVL
AMYLPKPLAF STFPAVLLLT TMFRLALSIS TTRQILLQQD AGHVVEAFGN FVVGGNLAVG
LVIFMILTVV NFLVITKGSE RVAEVAARFT LDAMPGKQMS IDSDLRAGLI DSQQARQRRE
NLAKESQLFG AMDGAMKFVK GDAIASLVIV FINMIGGFAI GVLQNGMAAG DAMHIYSVLT
IGDGLIAQIP ALLISLTAGM IITRVSADGQ KTDNNIGREI AEQLTSQPKA WIISSVGMLG
FALLPGMPTL VFLLISLASL GSGLFQLWRA KQSGLQDALL ADDGLPADQN GYQDLRRFNP
TRAYLLQFHT VWQGAAAAAL LVQEIRRLRN RLVYHFGFTL PSFDIEFTPN VPEDEFRFCV
YEIPQLRASF GVPLLAVPRG QMPEDALDDG MMLGLATRDE HHLLWLTPEH PMLQQPELSP
WSPDALILSR MENAIHRSGA QFIGLQETKS ILAWLESEQP ELAQELQRIM PLSRFASVLQ
RLASERVPLR SVRPIAEALI DIGQHERDIN ALTDYVRLEL KAQICHQYSQ DDSLTVWLLT
PETEELLRDA LRQTQNETFF ALTQEYAATL LGQLRRAFPP MMAPSSLILV AQDLRSPLRI
LLQDEFHHVP VLSFTELESH LSINVAGRID LLDRIDPFNA
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