| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1885 |
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| Symbol | |
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| ID | 8119362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 2153482 |
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| End bp | 2154135 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644852276 |
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| Product | type III secretion system protein |
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| Protein accession | YP_003004214 |
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| Protein GI | 251789493 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4790] Type III secretory pathway, component EscR |
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| TIGRFAM ID | [TIGR01102] type III secretion apparatus protein, YscR/HrcR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTCGG GCAGCTTCGA TCCGGTGATG TTTGCCCTGT TTCTGGGCAC CTTGTCGCTG
ATCCCTTTGT CGATGATCGT CTGTACCTGC TTTCTGAAGA TCTCGATGGT TTTGATGATC
ACCCGCAACG CCATCGGGGT ACAGCAGGTG CCGCCCAACA TGGCGCTGTA CGGCATTGCG
CTCGCCGCCA CCGTCTTCGT GATGGCCCCG GTATTCAGCG ACATCAAACA GCGATTTCAG
GACGCGCCGG TCGATTTCAG TAACCTCGAC GCGCTGGAAA GCAGCGTCAC CCGCGGCATC
GAGCCGTTGC AGAAATTCAT GTCGCGCAAC ACCGACCCGG ATATTCTCAC CCATCTGCAT
GAAAACAGCC TGCGTATGTG GCCGGCGGCG ATGTCCGAGA AAATCACCAC CCAAAGCATT
CTGCTGATCG TGCCCGCTTA TGTACTGTCG GAACTGCAGG CCGGATTTAA AATCGGTTTT
CTGATTTATA TCCCGTTCAT CGTTATCGAC CTGATTGTCT CCAACGTCTT GCTGGCGCTG
GGGATGCAGA TGGTCGCGCC CACCACGCTT TCGCTACCGC TCAAGCTGCT GTTGTTCGTG
CTGGTCAACG GCTGGACCCG CTTGCTCGAC GGCCTGTTCT ACAGTTACCT GTGA
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| Protein sequence | MTSGSFDPVM FALFLGTLSL IPLSMIVCTC FLKISMVLMI TRNAIGVQQV PPNMALYGIA
LAATVFVMAP VFSDIKQRFQ DAPVDFSNLD ALESSVTRGI EPLQKFMSRN TDPDILTHLH
ENSLRMWPAA MSEKITTQSI LLIVPAYVLS ELQAGFKIGF LIYIPFIVID LIVSNVLLAL
GMQMVAPTTL SLPLKLLLFV LVNGWTRLLD GLFYSYL
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