| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1753 |
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| Symbol | pspF |
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| ID | 8116836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 2006728 |
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| End bp | 2007720 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644852146 |
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| Product | phage shock protein operon transcriptional activator |
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| Protein accession | YP_003004084 |
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| Protein GI | 251789363 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1221] Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain |
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| TIGRFAM ID | [TIGR02974] psp operon transcriptional activator PspF |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCACACG AGAAAGAATC ACTACTGGGC GAAGCCAACA GTTTTCTGGA AGTGCTGGAA
CAGGTCTCAC AGTTGGCGCA GCTCAGCAAA CCGGTACTGG TGATTGGCGA GCGGGGAACC
GGCAAAGAGT TGATCGCCAG CCGCCTGCAT TACCTGTCTC CCCGTTGGCA AGGGCCGTTT
ATTTCGCTTA ACTGTGCGGC GCTGAACGAA AATTTGCTGG ATTCCGAGCT GTTCGGCCAC
GAAGCCGGGG CGTTTACCGG CGCACAGAAG CGCCATCTGG GGCGTTTTGA GCGCGCCGAC
GGCGGCACCC TGTTTCTGGA CGAACTGGCT ACCGCGCCGA TGCTGGTGCA GGAAAAGCTG
TTGCGGGTGA TCGAATACGG CGTGCTGGAG CGCGTGGGCG GCGGGCAGTC GCTGCAGGTG
GATGTCCGGC TGGTGTGCGC CACCAACGAA GACTTGCCGG CGCTGGCGGC ACAGGGAAAA
TTCCGCGCCG ACCTGCTTGA CCGGCTGGCT TTCGATGTGG TGCACCTGCC GCCGCTGCGC
CTGCGCCAAC AAGACATCAT GCTGCTGGCG CAGCACTTCG CGGTACAGAT GTGCCGGGAA
CTGGGCTTGC CGCTCTTTTC CGGTTTCAGC CCGCAGGCGG AACGCACCCT GCTGGATTAC
GGCTGGCCGG GCAATATCCG CGAGCTGAAA AACGTGGTGG AGCGTTCGCT GTATCGCCAC
GGCACCACCC CTGACCCGGT CGATCACATT ATTCTGAATC CGTTTAAACC ACTGGCGCCG
ACGCAGACCC ACGCCGCTCA GCCCCCCTCC GGCGCCGTAC CCACCCTACC GTTGAACTTG
CGTGACTGGC AACACCGTCA GGAGCGGCAA CTGGTAGAAC AGGCGCTCGC TCAGGCACAG
TTCAACCAAC GTAAAGCCGC CGGGTTGCTG GCGCTCACCT ACCATCAGTT TCGCGGTCTG
TTAAAAAAAC ACGAGATTGG CGCCAATGAA TAA
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| Protein sequence | MAHEKESLLG EANSFLEVLE QVSQLAQLSK PVLVIGERGT GKELIASRLH YLSPRWQGPF
ISLNCAALNE NLLDSELFGH EAGAFTGAQK RHLGRFERAD GGTLFLDELA TAPMLVQEKL
LRVIEYGVLE RVGGGQSLQV DVRLVCATNE DLPALAAQGK FRADLLDRLA FDVVHLPPLR
LRQQDIMLLA QHFAVQMCRE LGLPLFSGFS PQAERTLLDY GWPGNIRELK NVVERSLYRH
GTTPDPVDHI ILNPFKPLAP TQTHAAQPPS GAVPTLPLNL RDWQHRQERQ LVEQALAQAQ
FNQRKAAGLL ALTYHQFRGL LKKHEIGANE
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