| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1743 |
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| Symbol | |
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| ID | 8116826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 1994679 |
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| End bp | 1996610 |
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| Gene Length | 1932 bp |
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| Protein Length | 643 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644852136 |
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| Product | exoribonuclease II |
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| Protein accession | YP_003004074 |
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| Protein GI | 251789353 |
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| COG category | [K] Transcription |
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| COG ID | [COG4776] Exoribonuclease II |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02062] exoribonuclease II |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTCAAG ACAACCCGCT GCTTGCGCAG CTTAAACAGC AACTCCACTC TCAGACGCCA
CGAGCGGAAG GCATCGTCAA AGCCACCGAC AAAGGATTCG GTTTTCTTGA AGCCGACGCG
CAGAAGAGCT ATTTCATCCC GCCGCCGTAC ATGAAGAAAG TGATGCACGG CGACCGTATT
ATCGCCACGC TGCACACCGA GAAAGAGCGC GAAGTCGCCG AACCGGAATC ACTGGTGGAA
CCGTTCCTGA CCCGGTTTGT CGGCCGGGTG CAGAAAAAAG ACGACCGTTT GTCCATCGTG
CCCGATCATC CGTTGTTGAA AGATGCGATT CCCTGCCGCC CGGCGCGTGG CGTCGAACAG
GATTTCAAAG AAGGCGACTG GGCGGTAGCG GAAATGCGCC GTCATCCGCT GAAAGGCGAC
CGCGGTTTCT TTGCCGACCT GACCCAGTAC ATCACCACCG GCGACGACCC GCTGGCTCCC
TGGTGGGTCA CGCTGTCGCG CCATAATCTG GAACGTGAAG CGCCGAATGC CGATGCCGCC
GAACTCGATG ACGGCACGCT GGTACGCGAA GACCTGACCG GGCTGGACTT TGTCACCATC
GACAGCGCCA GCACCGAAGA TATGGACGAT GCCTTGTACG TGCAGGACAA CGGCGACGGA
ACGCTGGAAA TGACGGTGGC CATCGCCGAC CCGACCGCTT ACGTGCCTGC CGACAGCGAG
CTGGACGCCA TTGCCCGCCA ACGCGCCTTC ACCAACTACT TGCCCGGTTT CAATATTCCG
ATGCTGCCGC GCCACTTGTC GGACGATATC TGTTCGCTGC GCGCGAATGA GCGTCGCCCG
GTGTTGGCTT GCCGTATGAC CATCGCCGCC GACGGCGCAC TGAGCCAGAT TCGGTTCTTT
GCCGCCTGGA TCGAATCTCG CGCCAAGCTG GTGTACGACG AGGTCTCCGA CTGGCTGGAG
CAACAAGGCA ACTGGCAACC GACAAGCGAA AATATCGCCG TTCAGATCCG CCTGCTGCAT
CGCGTCTGCC AGGCCCGCAG CGCCTGGCGT ACCGCACATG CGCTGGTGTT CCGCGACCGT
CCGGATTACC GCTTCCTGTT GGGCGAAAAA GGCGAAGTAC TGGATATCGT TACCGAACCA
CGCCGCATCG CCAACCGCAT CGTGGAAGAA GCGATGATCG CCGCCAACGT CTGCGCGGCA
CAGGTGCTGC GCGACACGCT GGGCTTCGGT ATTTATAACG TCCACAACGG TTTCGACCCG
GTCAGCATTG ACCAGGCGGT CGCGGTACTG GAAAGCAATG GCATTCAGGC CGATGCTCAG
CAACTGCTGA CGTTGAACGG TTTCTGCATC CTGCGCCGTG AACTGGACGC GCAGCCGACC
CAATTCCTCG ACAGCCGCAT TCGCCGCTTC CAGACGTTTG CGGAAATCAG CACCGTACCG
GGCCCGCACT TCGGTCTCGG TTTGGAGGCG TACGCCACCT GGACGTCGCC GATCCGTAAA
TACGGCGATA TGGTTAACCA TCGGTTGCTG AAAGCCGTCA TCACCCAAAG CGCGGCGGAA
AAACCGCAGG ACGAGGTGAC GCTGCAACTG GCCGAGCGCC GCCGCCTCAA TCGCATGGCG
GAACGCGACG TCAGCGACTG GCTGTACGCC CGTTTCCTGA AAGACAAAGC CGGCACCGAC
GCCCGCTTTA CCGGTGAGAT TATGGACGTT AATCGCGGCG GTCTGCGTGT ACGTTTGCTG
GAAAACGGCG CCACCGCCTT TATTCCGGCC TCGTTTATCC ACGCGGTGCG CGACGAACTG
GTGTGCAGCC AGGACACCGG CATCGTCACG GTGAAAGGCG AACCGGTTTA CCGGCAGAGC
GATACGCTGA CGGTCATGTT GACCGAGGTA CGGCTCGAAA CCCGCAGCAT CATCGCCAAA
CCGGCGGCCT GA
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| Protein sequence | MFQDNPLLAQ LKQQLHSQTP RAEGIVKATD KGFGFLEADA QKSYFIPPPY MKKVMHGDRI
IATLHTEKER EVAEPESLVE PFLTRFVGRV QKKDDRLSIV PDHPLLKDAI PCRPARGVEQ
DFKEGDWAVA EMRRHPLKGD RGFFADLTQY ITTGDDPLAP WWVTLSRHNL EREAPNADAA
ELDDGTLVRE DLTGLDFVTI DSASTEDMDD ALYVQDNGDG TLEMTVAIAD PTAYVPADSE
LDAIARQRAF TNYLPGFNIP MLPRHLSDDI CSLRANERRP VLACRMTIAA DGALSQIRFF
AAWIESRAKL VYDEVSDWLE QQGNWQPTSE NIAVQIRLLH RVCQARSAWR TAHALVFRDR
PDYRFLLGEK GEVLDIVTEP RRIANRIVEE AMIAANVCAA QVLRDTLGFG IYNVHNGFDP
VSIDQAVAVL ESNGIQADAQ QLLTLNGFCI LRRELDAQPT QFLDSRIRRF QTFAEISTVP
GPHFGLGLEA YATWTSPIRK YGDMVNHRLL KAVITQSAAE KPQDEVTLQL AERRRLNRMA
ERDVSDWLYA RFLKDKAGTD ARFTGEIMDV NRGGLRVRLL ENGATAFIPA SFIHAVRDEL
VCSQDTGIVT VKGEPVYRQS DTLTVMLTEV RLETRSIIAK PAA
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