Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_1711 |
Symbol | |
ID | 8116792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | + |
Start bp | 1959763 |
End bp | 1960686 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644852103 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003004043 |
Protein GI | 251789322 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.78026 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATATAT TGCAAGAGCA TTTGGTGCGC GCTCGCGCCT CTGGCGGCGT GTTTGCGAGG TCTATCGCTA TCGCGCCTTG GGGGCTTCGT CTACCCGGCA CGATTCAGCT TGCCGTGCAC GCTATGATTC AGGGGCGGGC TTGGCTGTGG CTGGACGGCG GAGACGACCC CATCGAACTC AGGCCAGGAG ATTTGGCGCT GGTTCGCGGT GGGCCAGACC ACTTTGTTGC CCACGAGCCA GGGGCGTGCT GTGTCGTGCC GGAGGTTTTC CGGACAGAGC ACGCCGCTGA TGGAGCCGAG CACGATCCGC GTGCGGCGGT GTTCCTCTGC GGGGCTTATC GCTTTGCCGG AGATATCGGT GCGGGATTGG TCAATGGACT GCCGCCAGTA TTCCTGATTC CATCGCGTAT GGACAATCCA GTTCATGGTG TGGTTGAGCT ACTGTCGAGA GAACTCTCTC AGGCTGAGCC AGGTCGCCAA ACTGTGCTTG ACCGGCTGCT GGATGTTCTC GTTGTGCTTG GGCTTCGCAG CGGATTGGCA TCGAGCGTGA ATGCACCCGC ATGGGTCCGC GGTGCGACAG ACGCGCGTCT GTCGCTAGCG CTTCAGGCCA TGCACGGCGA CACGAGTAAG TCGTGGACCG TGGATGAACT GGCAAGGATG AGCAACATGT CTCGCGCCAC GTTTGCTCGC GTGTTTCAGG AGGTTCTTGG CAACACGCCA ATGCGATATC TCACCGACTG GCGGATGACT GTTGCACGCG ATCTTTTGAG AACGCAGGAC ATTCCGCTGA TAGAGGTGGC GGAGCGGGTT GGGTATTCGT CTCTGTATGC TTTTGTCACG GCGTTCCGCC GGCATCATGG GCAGCCTCCA GGAAAGTGGC GTCAGAGTGG AAAAGATTTG CCCGAAGCCA CGCTGGCTCA CTAG
|
Protein sequence | MDILQEHLVR ARASGGVFAR SIAIAPWGLR LPGTIQLAVH AMIQGRAWLW LDGGDDPIEL RPGDLALVRG GPDHFVAHEP GACCVVPEVF RTEHAADGAE HDPRAAVFLC GAYRFAGDIG AGLVNGLPPV FLIPSRMDNP VHGVVELLSR ELSQAEPGRQ TVLDRLLDVL VVLGLRSGLA SSVNAPAWVR GATDARLSLA LQAMHGDTSK SWTVDELARM SNMSRATFAR VFQEVLGNTP MRYLTDWRMT VARDLLRTQD IPLIEVAERV GYSSLYAFVT AFRRHHGQPP GKWRQSGKDL PEATLAH
|
| |