| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1214 |
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| Symbol | helD |
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| ID | 8118766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | + |
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| Start bp | 1383029 |
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| End bp | 1385086 |
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| Gene Length | 2058 bp |
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| Protein Length | 685 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644851611 |
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| Product | DNA helicase IV |
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| Protein accession | YP_003003560 |
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| Protein GI | 251788839 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.143113 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACTGA AATCGACCTC GTTGGGTAAG CATCTGGCAC AGCATCCCTA CAACCGTGTG
CAATTGCTGA ATGCCGGTGT CAATGTCAGC GGCGACCGAC ACGAATACCT CATACCCTTT
AATCAGTTGT TGGCGATTCG CTGTAAGAAA GGACTGATCT GGGGAGAGCT GGAATTCGAG
TTGCCGGAGA ACAAGGTGGT GCGTCTGCAC GGTACGGAAT GGCAGGAAAC GCAGCAGTTT
TTCCGTCATC TGTTCAAGTC CTGGCAGAGC TGGAGCCAAG GGATGAGCGA GGTGTGCAAA
GACGTATTGC AGCAACTGGC GGAGAAGATT ACGACGCAGG AAACGGTAGA TGGCTGGTTC
AGCCGTCAGA CACTGATGCG CGTTCAACAA GAGATCCGAA GTGGGTTCGC CGCGTTGCCG
TTACCATTGG CGCGTCTGGA TGAATTTGAA CATTGCCGGG ACAATTATCA GCGTTGTCTG
CGTTGGTTGG AGCAAGGCGA GACCCTGCGT CAGCAAGCCA ATCAGCTTTG GACGGAAACC
ACGTTGGTCG GGCACAAAGC CTTTTTCGAT ACGGTGGAAA GCTCACCGTT AAACCCCAGT
CAGTGTCGGG CGGTAGTGAA CGGCGAAAAT GCCGTGCTGG TGTTGGCCGG CGCAGGCAGC
GGCAAAACCT CGGTATTGGT GGCGCGAGCC GCTTGGTTGC TGCATCGGGC CGAGGCGTCG
CCTGAGCAGA TCTTATTATT GGCGTTTGGT CGGCAAGCTG CGGATGAAAT GAACGGCCGT
ATTCATGAGC GGCTGCATAC GGATGAGGTT CAGGCGAAGA CGTTTCATGC GTTGGCGTTG
CACATTATCC AGCAGTGCAG CCGTAGGGCT CCGGTCGTCA GTCGGCTGGA AACCGACGGC
GCACACCGAC GCACATTTCT GATCCAGCAC TGGCAGCAGC AGTGTGACGA AAAGAAAACC
CAGGCGAAAG GCTGGCGGCA GTGGTTGACC GAAGAACTGG AATGGACGTT GCCTGAGGGA
AATTTTTGGC AGGATGCGAC CATCGCATCA AGATTGGTCG GACGGCTGGA GCGCTGGTTA
GGGGTGATGC GGATGCAAGG CGGCACCCAA AGCGAGATGC TGGCATTGGC CGACGACGAA
ACCCGGCCGC TATTCCAGCA ACGGTTAAGA TTAATGGCGC CACTGCTGAA AGCATGGAAA
AAAGCCTTGA AGGATGAAGG CGCCGTCGAT TTCTCCGGTT TGATCCACCA GGCGGTCAAC
TATCTGGATA AGGGCCGTTT TGTCAGCCCG TGGCGGCATA TTCTGGTGGA TGAGTTTCAG
GATATCTCCC CTCAGCGCGC TCGTTTGCTG GAAGCGTTGC GCCGACAATC GCCGGAGAGC
AGCCTGTTTG CGGTTGGCGA TGACTGGCAG GCTATTTACC GGTTTAGTGG TGCAGAGTTA
ACGCTTACCA CGGCATTTGA GCCGCATTTC GGCGAAGGCG CGCAGTGTGT ATTGGATACC
ACCTATCGCT TTAACCATCG CATCGGCGAG ATCGCCAACC GCTTTATTCA GCAAAATCCG
GCCCAGCTAA AAAAAGTGCT CAACAGCTTG CGAGACGGCG ATAGAAAATC GGTAGTGTTG
TTGCCGCAAG AACAGTTGGA TGCCTTGCTG GATAAGATGA GCGGTTATGT GGCGGCACAG
GCGCGTATAC TGGTGTTGGC GCGTTATCAC CATTTGCGCC CTGATGTATT GGATAAGGCG
CAGACCCGTT GGCCGCATTT GAACCTCCAT TTCATGACGA TTCATGCCAG CAAAGGGCAA
CAAGCGGATT ACGTGATTGT GTTGGGGTTG CATGAAGGAC GCGACGGTTT TCCCGCGCCG
CAGCGAGAGT CTGTGCTGGA AGCGGTCTTG CTCCCTCGGC CAGAACCTTT TCCGGATGCA
GAGGAGCGCC GATTGTTATA TGTCGCGTTG ACCCGTGCCA GGCATCAGGT GTGGTTGATG
TACGATCGCG ACGAACCCTC GGTGTTTGTC GAGGATTTGC ACCAGCTAGG GGTGCCGATG
CAGCGCAAAC CGAGCTAA
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| Protein sequence | MELKSTSLGK HLAQHPYNRV QLLNAGVNVS GDRHEYLIPF NQLLAIRCKK GLIWGELEFE
LPENKVVRLH GTEWQETQQF FRHLFKSWQS WSQGMSEVCK DVLQQLAEKI TTQETVDGWF
SRQTLMRVQQ EIRSGFAALP LPLARLDEFE HCRDNYQRCL RWLEQGETLR QQANQLWTET
TLVGHKAFFD TVESSPLNPS QCRAVVNGEN AVLVLAGAGS GKTSVLVARA AWLLHRAEAS
PEQILLLAFG RQAADEMNGR IHERLHTDEV QAKTFHALAL HIIQQCSRRA PVVSRLETDG
AHRRTFLIQH WQQQCDEKKT QAKGWRQWLT EELEWTLPEG NFWQDATIAS RLVGRLERWL
GVMRMQGGTQ SEMLALADDE TRPLFQQRLR LMAPLLKAWK KALKDEGAVD FSGLIHQAVN
YLDKGRFVSP WRHILVDEFQ DISPQRARLL EALRRQSPES SLFAVGDDWQ AIYRFSGAEL
TLTTAFEPHF GEGAQCVLDT TYRFNHRIGE IANRFIQQNP AQLKKVLNSL RDGDRKSVVL
LPQEQLDALL DKMSGYVAAQ ARILVLARYH HLRPDVLDKA QTRWPHLNLH FMTIHASKGQ
QADYVIVLGL HEGRDGFPAP QRESVLEAVL LPRPEPFPDA EERRLLYVAL TRARHQVWLM
YDRDEPSVFV EDLHQLGVPM QRKPS
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