| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1140 |
|---|
| Symbol | |
|---|
| ID | 8118292 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 1310914 |
|---|
| End bp | 1311699 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644851541 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003003490 |
|---|
| Protein GI | 251788769 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5419] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGTCTC ATCTCGCCGG GCATTGCCGC CCTGTTGCCG CTTACCTTTA CGCCTTACAT
CTTGATGGCC CCGCGCTGGC CTGGGAATAC CTGCGCCGAA ATCCGGATTA CCGCTGTGAC
TGGCTCCACC GCCCGCGTCG CGCCGGCGGA GCACAGCGTT GGGGCCTACG CCTGTGGGAA
GATCCGTCCC GGGATGCGCG TGAGGCGCAT CCCGTCTGGT ATCCCGACCC TGACAGCGTT
GTGCTGCTTT ACCCGGATGC CGACCCACCG CCCGTTGCCC CGGTTTTCGC CTTTTGGCAC
ATGCCCGGCC GTCATGATCT GGTGCATGAT GGCCGACGCT TACTGCTGTT GACGCGCTGG
CCCGGCGGTT GCCTACGGCT GGTGTGTGTA CCGACGCTGG CTGATGGCAT GGCGTATGTC
TGTGCCGTCA GGGGCGGTGT GTTGCCGCGT TCCCGTTACC GGTTATTAGC GGCTGCGTTG
AGTCGCGGGG TAGAAAGGCG TAGCGCAATG GTTTGTCCCC GGCCTTCCCC CACCGCATTA
CGGGAGTTAC ATACCCTGCA GGCGCTGGAT GCGTCGCTGG CCGGCGCTTC CTTGCGTGAC
GTGGCGGCCA GTTTAATGGG TGCGGAGGGC CTTGCTGACG CCTGGCACGC GGATAGCGGC
CTCCGCTCCC GCGTCCGGCG GCTGGTCTCT CGCGGCAAGC GGCTGATGTG GGGCGGGTAT
CGCTGTCTTG TTTCCCCGTC CGTGGCTGGG AAGGGTCGTT CTGTTTCCGG CGCAAAACGG
CCCTGA
|
|---|
| Protein sequence | MTSHLAGHCR PVAAYLYALH LDGPALAWEY LRRNPDYRCD WLHRPRRAGG AQRWGLRLWE
DPSRDAREAH PVWYPDPDSV VLLYPDADPP PVAPVFAFWH MPGRHDLVHD GRRLLLLTRW
PGGCLRLVCV PTLADGMAYV CAVRGGVLPR SRYRLLAAAL SRGVERRSAM VCPRPSPTAL
RELHTLQALD ASLAGASLRD VAASLMGAEG LADAWHADSG LRSRVRRLVS RGKRLMWGGY
RCLVSPSVAG KGRSVSGAKR P
|
|---|
| |