Gene Dd1591_1100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_1100 
Symbol 
ID8118252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp1272536 
End bp1273660 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content52% 
IMG OID644851502 
ProductABC transporter, substrate binding protein 
Protein accessionYP_003003451 
Protein GI251788730 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0595516 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAAGA AATCATGGCG TCACATTTTG CTGGCAACCA CACTGACAAC TTCTTTTGCC 
AGCCTCGCCA CCCAGTATCC CCTCACGTTG ACTGATATCG ACGGACAAAG CGTCACTATC
CAACAGGAAC CGCAGCGCGT TGTGTTACAA GACGGCCGCG ATATCATGGC GCTGGCACTG
CTTGACCGCG ATAATCCGTT CCACCGTCTT GTTGCCTGGA ATAACTTGCC CAAAAAACAA
GACTCCGCCA CCTGGGATGT ACTGAAAAGC AAATGGCCGC AGTCCGAAGG CATTCTGGAC
ATGGGCTTTA GCGACAAAGG CGAAGTGGAA CTGGAAAGCA TTCTGGCTAA AAAACCGGAT
CTGATGATTG CCCAACTGCG TGCGAAGCCG GCTTTAATGG AAAATGGCGT CATCGGTAAG
CTGAACGCGT TGCACATTCC GCTGGTGTTC GTGGATTATG AAATCAACCC GGCGCAAAAC
ACCGCACCCA GTGTTGATTT GCTCGGCAAA GTGCTGAACC GCGAAGAAAA CGCCAAAGCC
TATACTGATT TTTATCGCCA GCATTTTGCC GATATCCAAA AAGTCACGAC CGGCATCACC
CCCCAACCCA ATGTGTTTAT TGAACCGATC GCCGGCAACA CCGATGCCTG CTGCTTTACC
CATGGTCACA ACGGCTGGGG CGGCCTGCTG GAAGCCATCG GCGCGAAAAA TATCGGTTCC
GGACTGCTGC CGGGCGCATC AGGCTTTGTC TCATTGGAAA AAGTGATCAG CGAAAAACCC
GATACCTACA TCATGACCGG CTCCAAACGC GGCAACGGCA CCAGTAAAAT CCTGCCGTTT
GGTTATAGCG CCAGCGACAG CGATATTCAG GACAAAGCCA AAGCTCTGCT GAGCCGCACC
GGCATTGATC AGATCCCGGC AATTAAAGCC GGCCAGGTCT ATGGGGTTTA CCACCATTTC
TATAACCACC CATATAACAT TGTCGGCATG GAGTATCTGG CTAAAGCGGT GTATCCGAAG
CAGTTCGGTT CGCTGAACCC GGACGATACC TACCATTACA TCGTTCGCCA TTTTACTACC
CTGCCTGACA ACAACTTTGT GTTTGCCCGT AAACTGGCCG AGTAA
 
Protein sequence
MLKKSWRHIL LATTLTTSFA SLATQYPLTL TDIDGQSVTI QQEPQRVVLQ DGRDIMALAL 
LDRDNPFHRL VAWNNLPKKQ DSATWDVLKS KWPQSEGILD MGFSDKGEVE LESILAKKPD
LMIAQLRAKP ALMENGVIGK LNALHIPLVF VDYEINPAQN TAPSVDLLGK VLNREENAKA
YTDFYRQHFA DIQKVTTGIT PQPNVFIEPI AGNTDACCFT HGHNGWGGLL EAIGAKNIGS
GLLPGASGFV SLEKVISEKP DTYIMTGSKR GNGTSKILPF GYSASDSDIQ DKAKALLSRT
GIDQIPAIKA GQVYGVYHHF YNHPYNIVGM EYLAKAVYPK QFGSLNPDDT YHYIVRHFTT
LPDNNFVFAR KLAE