Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_1049 |
Symbol | |
ID | 8120322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | + |
Start bp | 1208815 |
End bp | 1211463 |
Gene Length | 2649 bp |
Protein Length | 882 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644851445 |
Product | alpha-L-rhamnosidase |
Protein accession | YP_003003400 |
Protein GI | 251788679 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCAGTA TAACCAAGCC TATGCTAAGA ATTAATTGCA AATCAAATTC AATTGTGGTG GATAAGTTAC CTTTACATCT AAGCTGGAGT GTTGACTTCA AACAGAAGGC GTATGAGGTT TCTGTCATTA AAAATGATAA GGTAATTTAT TTCGCCGAAC AAATAAGCAA CAATACAGTA TTGATGATTG ACTCGTTCGA ACTAGATAAG AATTCAGAAT ATGTTGTTGA GGTCTGTGCC TATAACCAGG ATGAGCAATA TGATATTTTA AGAAATACGT TCAAGACAGG TAATTTCGGA CATTTCATTG GTCAATGGAT TTCCGGTGGT AAGACACTAG CGACAGAGTC AGATTATTAT CTTGAAAATC GGAATTCAAT ACTGAGGAAG GTGTTTGTCG TTGACCAGGA TATTGTTGAT TCGAATATTA ACATTGTTGG CTTAGGTTAT TATAAACTTT ATATTAATGG GGAAGAAGTC GGTGATAGTG AACTGAATAC GGATTGGACT AACTATAATG AAACCGTTTA CTACGACACA TATGATGTCA ATCGTTATTT AAAAAAAGGC GATAATGAAA TTCTGATTGA ATTAGGAAAC GGTTGGTTCA ATCCGGCACC ATTGACTTTA TTTGGTAAGT ATAATTTAAG AAATGTATTG TCTATAGGAG AGCCTCAAAC GATTGCGGAT TTAGTCATCA AGTATGCAAA GGAGACTGTC ACTGTCTCAA GTGATGAATC TTGGGAAGTG TGTGATGGGC CATACCTTTT CAATAACATA TATCTGGGCG AAGTGTTGGA TTTTCGATTA ATTAAAGGCC AAAATACATT TTTAGTAACA AAGCCAGTTT GGAGGCCGGT AGTGATTAAT CATGGCCCGA GAGGAAGACT GATTCCAAGT TTTATTCCAA AAATAAAAAA ATCAGCGCAA CTCACACCTC ATCATATTCA TGTAGTTGAT GAAAACGAAA TTATCGTCGA TTTTGGTGAG GTATTAACGG GATTCATTGA TATCACATTA GCGGCATACG ATGCACAAGA GATTGAGTTA ATTTATAGTG AGGAAATTAA CAACGATTAT ATTCTTCAAA CAGCTTCAAC CCTGGCGGGT TTTATCGGTG AAGAGGTTGA TAATGGGGTT GTTATTCCCG GCGGCCCCGG TGCTCCACAC CGTGCGGAGC AAAAAGACAA AATAATATGC AAAAATGGTT TTAATCGATT CTTAAATAAG TTTACATACC ACTCATTTCG TTATATGCAG ATTAAAGGAT TAACCCTTGA TCAAATCCAT GACGTTCGCG CAGTGTATGT TCACACCGAC CTTGCTGAAA ATGGAACATT TAATTGTTCG GATGTTTATT TAAACAAATT ACTCAAAACT GGAAATATAA CCAAGCTTAA TAATATTCAT TCTGTTTTTA GCGATTGTGC CAGAGAGCGG TTTGCATACG GTGGCGATAT TGTCGCACTA GCGAATTCAC AGGTTTATCA GTTTGATACT GCAAGTTTAT ATGAAAAAAC CATCTATGAT TTTGTTGATG ATATCCGCTT GAATGGCGGG TTTCCGGAAA CGGCGCCATT TGTAGGGATT AAGACAAATG GAACCGGCGA AGAGGCCGGA CCACTAGGTT GGCAGCTGGC TTTCTCATAT TTACTCAACA TTCATTATCG GCATTACGGC AATTTACAAC TGATAAAAGA TATGTTCCCT TACTTTGAGA AACAGGTAAT CTATTTGAAT GGTTTTAACC TGGATGAATT GAGTCTCTGT TGTTTGGGTG ATTGGGGTAG TCGCGATAAA AATTCTGAGG ATTATAAATC CAGTTCACCG GCTATCCGTT TTACGACCGC TTGTTTTTAT TATTTTCATA TTCTTCTGAT GGCAAAATTC TCAACATATT TATCGTTTGA CGAAAAAAGT GAATTTTACT TATCCCAAGC CAGTGCGTTA AAAAATAAGA TTATTAATCA ATATAGAAAT ACTGATGGGA GTTTTTCAGA TAAAAGCCAG ACTAGCTATA TTTTTGCAGT CTATTTTAAT TTGGTTGATG ATATCAGTGA TGCTGTTAAT CAATTAGTGG CATTGATTCG CAATAATAAC TATGTCATGC GATGTGGTAT ATTTGGGCAA AGCTTTTCCT ATGAAATATT GCGTCAGCAT GGCCATAATG ATGTAGTTTA TCATTGGTTA AATTCAGAAG ACGGCTTCAA AAGCATGTTG GGTAGTGAGT ACAGAACATT GAAAGAGTAT TTTGGTGATA ATAAACATGG TTCCTGTAAT CACGCGATGT TCAGCTCTTA TATCAGTTGG CTATATCAAG GATTGGGCGG TATTTCTATT CAAGAACATG CTATTGCATC GGATCAGGTC GTTATTAGTC CATTTATTAT TGATTCGCTG GACTATGTTG AATGTGAATA TCAATCTGTT CGTGGGTTGA TTTCTTGCAA ATGGCATCGT GTAGAAGCAC ATGTTGAATT AGTGATCAAA GTCCCATTTA ATTTAAAAGG ATGTATGCTT TCCCTCGATA AAAGATATAA TATCCATGTG AATAATGTTA TTGAAATTTA TTCTGATGAG TCAAAAAGGT ATTTTGATAT TACCGATATG GGTGAGGTTG AAATCATTTT GACTCCTGCG TTGCATTAA
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Protein sequence | MVSITKPMLR INCKSNSIVV DKLPLHLSWS VDFKQKAYEV SVIKNDKVIY FAEQISNNTV LMIDSFELDK NSEYVVEVCA YNQDEQYDIL RNTFKTGNFG HFIGQWISGG KTLATESDYY LENRNSILRK VFVVDQDIVD SNINIVGLGY YKLYINGEEV GDSELNTDWT NYNETVYYDT YDVNRYLKKG DNEILIELGN GWFNPAPLTL FGKYNLRNVL SIGEPQTIAD LVIKYAKETV TVSSDESWEV CDGPYLFNNI YLGEVLDFRL IKGQNTFLVT KPVWRPVVIN HGPRGRLIPS FIPKIKKSAQ LTPHHIHVVD ENEIIVDFGE VLTGFIDITL AAYDAQEIEL IYSEEINNDY ILQTASTLAG FIGEEVDNGV VIPGGPGAPH RAEQKDKIIC KNGFNRFLNK FTYHSFRYMQ IKGLTLDQIH DVRAVYVHTD LAENGTFNCS DVYLNKLLKT GNITKLNNIH SVFSDCARER FAYGGDIVAL ANSQVYQFDT ASLYEKTIYD FVDDIRLNGG FPETAPFVGI KTNGTGEEAG PLGWQLAFSY LLNIHYRHYG NLQLIKDMFP YFEKQVIYLN GFNLDELSLC CLGDWGSRDK NSEDYKSSSP AIRFTTACFY YFHILLMAKF STYLSFDEKS EFYLSQASAL KNKIINQYRN TDGSFSDKSQ TSYIFAVYFN LVDDISDAVN QLVALIRNNN YVMRCGIFGQ SFSYEILRQH GHNDVVYHWL NSEDGFKSML GSEYRTLKEY FGDNKHGSCN HAMFSSYISW LYQGLGGISI QEHAIASDQV VISPFIIDSL DYVECEYQSV RGLISCKWHR VEAHVELVIK VPFNLKGCML SLDKRYNIHV NNVIEIYSDE SKRYFDITDM GEVEIILTPA LH
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