Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_0919 |
Symbol | |
ID | 8117735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | - |
Start bp | 1066900 |
End bp | 1068246 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644851312 |
Product | integrase family protein |
Protein accession | YP_003003277 |
Protein GI | 251788556 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.295922 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACACCA GCAACCGCAT CCCTTTCAGT AAAGAAAGGC TGTCTAGCCT GCCACTCCCC GAAACGGGTC AAAGAACAAC GTGGTACGAT ACTAAAACAC CGGGTCTTCA ACTCAGGGTA TCGTCCACAG GCATCAAAAC GTTTTCGGTT TATCGCCGTA TGAAAAATGG GCAGCCAGAG CGTGTAACGC TTGGTCGTTT CCCGGCGATG ACGGTAGAAC AAGCTCGCAA AGCAGCGTCT GCGGTCAATG CAGAAATAGA GGCAGGAGCT AATCCGGCAC AAGCGCGTAG AGCGGTACGA GAAGAGCTCT CATTTTCTGA AATGTTTGAT TTCTTTATTA AAGGAAAACG TAAGCGAGAT GGGTCAGCTC TGGGGGCCAG AACCATCAGG GATTATCAGG ATGTGTTACG TCTGTATCTT GATGGTCTAA GCCAGAAAAA ACTATCTCAC ATCACCCGAA GCGATGTGAA AGCCATTCAT CAGAAAGTCT CCCAAAAGAG TGCATCACAG GCTGACCGGA CTCTGGCGCT TATTTCGTCG GTTTACTCTT TTGCCATTGA TCAGGAGTAT TTTAGTGGCG AAAACCCCGC CAGCCGGGTA CAAAAAAATC CGGCTCCAAT TCGTGACCGT TTTGCTCAGG CCAGCGAATT ACCCTACTTA CTGGAAGCCA TTGGTGAGTC CTCAAACCGT GATTACTTTC TGCTGGCATT GTTAACCGGC GCTCGTCGTT CCAATACACA AGCAATGGCG TGGCATGACC TCGATCTTGA GGCAGGTATC TGGCGTGTCG GCATGACTAA AAACGGTACG CCACAGAACG TCCCCCTCTC ACCTGAAGCA GTCGCCATAC TGAAAGAACG CAAGGTTGTG TTTGGAAAAT CAACCTATGT CTTCCCCGGA AAGGGAAAAA CCGGGCATCT GGTCGAGCCT AAAAAGGGAT GGGCAAACAT TCTGAAAAAA GCCAGTATGC GCAGGCTGAT TGATTTGCTG GCGGAGAAAA ATATCATCCC GGCGACGGAA CAATTGTCAC TGCGGCAGCA GCTTGCTCTC TACCCTGATG CCACAGCTGA CAGCCTGATG AGGATATCTA GCAGCAGTAA CGTCCCCCTC TCAGCATATG ATATAACCGA TCTACGAATA CACGACCTGC GCCGGACACT GGGAAGCTGG CAAGCTAAAA CCGGGGCATC TTTGACGGTC ATCGGTAAGA GTCTCAATCA TAAGACCCAT CAGGCTACCG CTATCTATGC CCGGCTCGAT CTAGACCCGG TAAGGCAATC GGTGAATACC GCGACACAAG CCATGTGGGA AGCGGCGGGT ATGAAGCCGA AGAGTGACAA CAACTAA
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Protein sequence | MNTSNRIPFS KERLSSLPLP ETGQRTTWYD TKTPGLQLRV SSTGIKTFSV YRRMKNGQPE RVTLGRFPAM TVEQARKAAS AVNAEIEAGA NPAQARRAVR EELSFSEMFD FFIKGKRKRD GSALGARTIR DYQDVLRLYL DGLSQKKLSH ITRSDVKAIH QKVSQKSASQ ADRTLALISS VYSFAIDQEY FSGENPASRV QKNPAPIRDR FAQASELPYL LEAIGESSNR DYFLLALLTG ARRSNTQAMA WHDLDLEAGI WRVGMTKNGT PQNVPLSPEA VAILKERKVV FGKSTYVFPG KGKTGHLVEP KKGWANILKK ASMRRLIDLL AEKNIIPATE QLSLRQQLAL YPDATADSLM RISSSSNVPL SAYDITDLRI HDLRRTLGSW QAKTGASLTV IGKSLNHKTH QATAIYARLD LDPVRQSVNT ATQAMWEAAG MKPKSDNN
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