Gene Dd1591_0885 details

Gene Information

• Locus tag: Dd1591_0885
• ID: 8117700
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya zeae Ech1591
• Kingdom: Bacteria
• Replicon accession: NC_012912
• Strand: +
• Start bp: 1026254
• End bp: 1026868
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 644851277
• Product: methylthioribulose-1-phosphate dehydratase
• Protein accession: YP_003003243
• Protein GI: 251788522
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
• TIGRFAM ID: [TIGR03328] methylthioribulose-1-phosphate dehydratase

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTGATA CCCCACAACT GGATGCCCTG GTGGCCGCCT GCCGCTGGAT CGGCGAGAAA 
GGCTGGTGCC CGGCGACGGG CGGTAATATG TCCGTTCGTC TGGATGAACG GCAATGCCTG 
ATTACCGAAT CCGGTAAAGA CAAAGGCAGC CTGAGTGCGG AAGATTTTTT GCGGGTCGAT 
ATCGCGACGA ATCACGTACC GAGCGGTCGC ACGCCGTCGG CGGAAACCGG CTTGCATACG 
TTGCTTTATC GCTTGCTTCC GGCGGTCGGT GCGGTACTGC ATACCCATTC GGTCAACGCC 
ACGGTGCTGT CGCGGGTAGA AAAAAGCGCA GCATTGGTGT TGCAGGGCTA CGAAATGCAG 
AAGTCGCTGA GCGGCCAACG TACTCACCTG GATGCGGTAG CGATCCCGAT TTTCGATAAC 
TCTCAGGATA TTCCGGCACT GGCGCAGCGG GTTGCGGCCC ATCATGAGGT CGCGGCGCTG 
CATTACGGTT TGCTGGTGCG CGGGCACGGC CTGTACTGCT GGGGCAATGA TGTAAAAGAG 
GCTCGCCGCC ATCTGGAAGG GCTGGAGTTC CTGTTCCAGT GTGAATTGCA ACGACGTTTA 
CTGGAGACGA AATGA 

 

Protein sequence

MSDTPQLDAL VAACRWIGEK GWCPATGGNM SVRLDERQCL ITESGKDKGS LSAEDFLRVD 
IATNHVPSGR TPSAETGLHT LLYRLLPAVG AVLHTHSVNA TVLSRVEKSA ALVLQGYEMQ 
KSLSGQRTHL DAVAIPIFDN SQDIPALAQR VAAHHEVAAL HYGLLVRGHG LYCWGNDVKE 
ARRHLEGLEF LFQCELQRRL LETK