Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_0741 |
Symbol | |
ID | 8119464 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | + |
Start bp | 852670 |
End bp | 853137 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644851128 |
Product | type VI secretion system effector, Hcp1 family |
Protein accession | YP_003003100 |
Protein GI | 251788379 |
COG category | [S] Function unknown |
COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.155948 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCACATA TTGTATATTT GACGTTAGAG GGTGAAAAGC AAGGGTTAAT TTCATCAGGA TGTTCTACCC TTGATTCGAT CGGAAATAGA TACCAACGTG GGCATGAAGA CCAAATACAA GTATTGAGCC TAAACCATAC TATAACCAGA GAAGACAATG TAGCGCACCA CCCAGTGCAA TTGACTAAAC CTATAGATAA ATCATCCCCA TTACTTGGTG TTTCAGTTTC GACGAATGAA TCGCTTACAG CAACGTTTTA TTTTTATCGA ACCAATCAGG CTGGACAGTT AGAGATCTTT TATGAGCTTA AACTGACTGG TGCCAGAGTT GTTGCTGTTT CATCAACATA TCCCCACTCA ATTAATAATA CAGAGTTAAT TCCTTTTGAA GATGTTATGC TAAGATATAA TACTATATCT TGGTCACATA AAATTGCAGG TACGTCAGGA TATAGTATTT GGGGGTGA
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Protein sequence | MSHIVYLTLE GEKQGLISSG CSTLDSIGNR YQRGHEDQIQ VLSLNHTITR EDNVAHHPVQ LTKPIDKSSP LLGVSVSTNE SLTATFYFYR TNQAGQLEIF YELKLTGARV VAVSSTYPHS INNTELIPFE DVMLRYNTIS WSHKIAGTSG YSIWG
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