Gene Dd1591_0729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_0729 
Symbol 
ID8119452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp839994 
End bp840779 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content60% 
IMG OID644851116 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003003088 
Protein GI251788367 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCGCT TTGAACAACG CTACCACCAG ATGGTGGTCT GGCTGGTGCT GCTGATCCTG 
ATGTTGCCGC TGCTGGCCAC GCTGGGCTAC GCGCTGGCCA CCGAGTGGGG GGCGACCATT
CTGCCGCGCG GCCTGACGCT GCGGTGGTTT GTGGAATTGT GGAGCGATGC ACGCTTTCTG
GCGTCACTCG GCCACTCGAT GTTGATCTGC TTTGGCGCGT TGCTGTTTTC GCTGCTGTTG
GTGTTGCCCG CCATGTTCGT GATCGCCTGG GCGTTCCCGC GGTTGGACGC GCTGATGAAC
GTGCTGATCC TGCTGCCGTT TTCCGTGCCG CCGGTGGTCT CTTCCGTCGG GCTGTTACAA
ATGTATTCGT CCGGGCCGCT GGCGATCACC GGAACGCCGT GGATCCTGAT CGGCTGCTAT
TTCACCATCG CGCTGCCGTT TATTTACCGC GCCATCGCCA ACAACATGCA GGCGATTAAT
TTACAGGAAC TGCTGGATGC CGCTCACCTG CTGGGGGCCA GCACCTGGCA GGCCGCGCTG
TGGGTGGTGC TGCCCAACCT GCGCAAAGGC GTGATGATCG CCGTGTTGTT GTCGTTCTCG
TTTCTGATCG GCGAATTCGT GTTCGCCAAT CTGCTGGCCG GCACCAACTA TGAAACCTTG
CAGGTCTATC TCTACAACAA ACGCAACGAC AGCGGGCACT TTACCAGCGC GCTGGTGATC
TCCTATTTCC TGGTGGTGCT GCTGGTGACC TGGCTGTCTA ACTACCTGAA CCGAGGACAA
CGCTGA
 
Protein sequence
MSRFEQRYHQ MVVWLVLLIL MLPLLATLGY ALATEWGATI LPRGLTLRWF VELWSDARFL 
ASLGHSMLIC FGALLFSLLL VLPAMFVIAW AFPRLDALMN VLILLPFSVP PVVSSVGLLQ
MYSSGPLAIT GTPWILIGCY FTIALPFIYR AIANNMQAIN LQELLDAAHL LGASTWQAAL
WVVLPNLRKG VMIAVLLSFS FLIGEFVFAN LLAGTNYETL QVYLYNKRND SGHFTSALVI
SYFLVVLLVT WLSNYLNRGQ R