| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0437 |
|---|
| Symbol | |
|---|
| ID | 8118526 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 504812 |
|---|
| End bp | 506212 |
|---|
| Gene Length | 1401 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644850830 |
|---|
| Product | putative secreted protein |
|---|
| Protein accession | YP_003002803 |
|---|
| Protein GI | 251788082 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAGTA ACGGTCTACT GAAATGGTTG ATGATCCCGG TGATCTTGCT GGTGCTGTTC
GTTGGCATCC GCATATTCTC TGGTCATGGC ACGCATACAC CAGACACAGC CGATACAGGT
AGCCAGCTCA CCCCGGAGGA AATGAAGGCG TTGGGTATCG AAGGGGACAC ACCACGTGAC
ACCGTCGCCA CACTGGTAGC ACAGGTCCGG CAACTGCGCT CCGAACTGCA AACCGCGACT
GCCGACAACC GGACACAGCA CGAAGAAAAC CAGCGTCTGC GCCAGCGTGA AAGCACCATT
GACCAGCGTA TCAACACCGC ACTGGAGTCC GAGCGAGCTA ACCTGCGCCG CGACCAGGAA
CAGTTCAGTA GTGAACGTCA GCAGACTGAA GGTCTGCTGG CAGATTTGCA GCGACGGCTG
GATAGCATAG GCAGCAATGG TCACGCAGAC TTGCCTGTCG GTCTTGGTCT GCGAGACGGG
GATGCTGAAG GGTTCGGCAA CGAGGCCGCT ATCCGCTGGG TAGAGCCTGA CGATGCCAGG
CAGACTGCAG GCCGCAATAG CAACACGGCG CGGAGCTTCC CGACAAGTTT CGGACCTGCG
CAGAAGACAC TGGACACTAC GGTCGAAAGT GTAACCCGTG CCAGCGCTAC CGGAACCAAA
CCCGCCAGGG CTGTTTACAC CGTACCCACC AATTCAACAC TGATGGGCTC AGTCGCGATG
ACTGCGCTGA TCGGCCGTGT GCCTATCGAC GGTACCGTCA ACGACCCCTA CCCCTTCAAA
GTGTTGGTTG GCCCCGACAA CCTGACGGCC AACGGCATCG ATATCCCCGA TGTGGCCGGA
GCCGTGTTCA GCGGCACCGC CTCCGGCGAC TGGACGCTCT CATGCGTCAG GGGGCAGGTA
CGCTCAATCA CCTTCGTTTT CCACGACGGC ACCATCCGCA CCATTCCGCA AGATAGCGAA
CACAGTCATC AGCAAAGCAA CGACCAGAAC AGTCTCGGAT GGATCAGTGA TCCCTACGGT
ATCCCGTGCG TGTCCGGAGA GCGCCGCAGC AATGCCCAGC AGTATCTCGG CACGCAGGCT
TTGATCACCG CAGCGGGTGC AGGCGCGGCA TCGCTCATGG ATTCAAAAAG CAGCCAGATG
TCCTACACCG GTGCCAACGG TTCCATCGGC ACGGTGGGGA TCAGCAGCAA CGAGGCGGTG
GGGCGCATTC TTGCCGGCGG CGTACGCGAC ATGTCGGATT GGGTCAACAA GCTCTATGGC
CAGGCCTTCG CAGCGGTCTA TGTGAAGCCA GGCGCACAAG TTGCCGTTCA CCTCGAAAAA
CCTCTCGCCA TTGACTACGA AACCGAAGGC CGCAAGGTCG ACCATCGTAC AGGAGAAAGC
CATGCATTCG AACTGGACTA A
|
|---|
| Protein sequence | MPSNGLLKWL MIPVILLVLF VGIRIFSGHG THTPDTADTG SQLTPEEMKA LGIEGDTPRD
TVATLVAQVR QLRSELQTAT ADNRTQHEEN QRLRQRESTI DQRINTALES ERANLRRDQE
QFSSERQQTE GLLADLQRRL DSIGSNGHAD LPVGLGLRDG DAEGFGNEAA IRWVEPDDAR
QTAGRNSNTA RSFPTSFGPA QKTLDTTVES VTRASATGTK PARAVYTVPT NSTLMGSVAM
TALIGRVPID GTVNDPYPFK VLVGPDNLTA NGIDIPDVAG AVFSGTASGD WTLSCVRGQV
RSITFVFHDG TIRTIPQDSE HSHQQSNDQN SLGWISDPYG IPCVSGERRS NAQQYLGTQA
LITAAGAGAA SLMDSKSSQM SYTGANGSIG TVGISSNEAV GRILAGGVRD MSDWVNKLYG
QAFAAVYVKP GAQVAVHLEK PLAIDYETEG RKVDHRTGES HAFELD
|
|---|
| |