| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0200 |
|---|
| Symbol | glpA |
|---|
| ID | 8117162 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 241076 |
|---|
| End bp | 242719 |
|---|
| Gene Length | 1644 bp |
|---|
| Protein Length | 547 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644850592 |
|---|
| Product | sn-glycerol-3-phosphate dehydrogenase subunit A |
|---|
| Protein accession | YP_003002572 |
|---|
| Protein GI | 251787851 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR03377] glycerol-3-phosphate dehydrogenase, anaerobic, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.207234 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAACA ACGGCTTGCG GCGAGAAACG GATGTAGTGA TTATCGGCGG TGGCGCTACC
GGCGCAGGGA CGGCCCGCGA CTGTGCGTTG CGCGGGCTGC GTTGCCTGTT GCTGGAACGG
CACGACATCG CCACCGGCGC TACCGGCCGT AATCATGGAC TGCTGCACAG CGGGGCGCGT
TATGCGGTCA CCGATGCCGA ATCCGCCCGC GAATGTATAG AGGAAAACCA GATTCTGCGG
CGCATCGCCC GCCACTGTAT CGAGCCGACC GATGGCCTGT TCCTGACGTT GCCGCAGGAT
GACCTCGATT ATCAAACCCG TTTTATCGCC GCCTGTCAGC GGGCGGGGAT CCGGGCGCAG
GCCATCGATC CACAAGAGGC GCTGCGGCTG GAGCCGGCCG CTAATCCGGC GTTGATCGGC
GCCGTGCGTG TGCCGGACGG CACGGTCGAT CCCTTCCGGT TGACCGCCGC CAATATGATC
GATGCCTGCG AGCATGGTGC GGAAGTACTG ACTTACCACG AAGTCATCGG ATTGATCCGT
CAGGGCGATC GTGTCGTCGG TGTGCGCGTT TTCGACCATA AACGCCAGCT AGCCAACGAA
ATTTATGCGC AAGTGGTGGT GAATGCGGGC GGTATCTGGG GGCAGCGCAT CGCTGAGTAC
GCAGACCTGA ATGTCCGCAT GTTTCCGGCC AAAGGCGCAT TGCTGATTTT GGGCCACCGC
ATCAATAACC GGGTGATCAA CCGCTGCCGG CCACCGGCTG ACGCCGACAT TCTGGTGCCG
GGCGATACCA TTTCGCTGAT CGGCACCACC TCAACCCGTA TCGATTACGA CCAGATAGAC
AACATGACGG TAACGCCGGC GGAAGTGGAT ACGCTGATCC GTGAAGGCAG CCTGCTGGCG
CCGCAACTGG CGCAGACCCG CATTCTGCGT GCTTATGCCG GGGTGCGGCC GCTGGTGGCG
AACGATAACG ACCCGTCCGG GCGTAGCGTC AGTCGCGGCA TTGTGCTGCT GGACCATGCC
AGCCGCGACG GTCTGGAAGG TTTCGTCACC ATCACCGGCG GCAAGCTGAT GACCTACCGG
CTGATGGCGG AATGGGTGAC GGATAAAGTG TGCGAAAAAC TCGGCCACCA GGTTGCATGT
ACCACGGCAT CACGACCGTT GCCGGGGTCG GAAGTCGCGG ACCCGGATAC GCCGCAGGCC
GCCTCGCCGC TATCGGCGCC GCTGCGTGGT TCCGCCATTT ACCGCCACGG ACATCGTGCC
GTAGCGCTGG TCTCCGGCCA GCGGGTGGAC AGCAGTCTGG TGTGTGAATG CGAAGCGGTG
ACGGCCGGTG AAGTGCGTTA CGCGGTGGAG TCGTTGCAGG TTAATAACCT GACCGACCTG
CGCCGGCGCA CCCGCGTCGG CATGGGAACC TGTCAGGGGG AACTGTGTGC CTGCCGTGCG
GCCGGTCTGT TGTGCCGTCT CGGGCAATCC ACGCCGCAAC AGGCGGTATC GCAACTGAGC
CAGTTCCTTA ACGAACGCTG GAAAGGTATG CGTCCCATCG CCTGGGGGAA CACACTGCGG
GAAAGCGAAT TTACCAGTTG GATTTATCAG GGCTTGTGCG GACTGACCGA ACGCCCGGAA
CAGGAGGGCG GCGATGCGTT ATGA
|
|---|
| Protein sequence | MANNGLRRET DVVIIGGGAT GAGTARDCAL RGLRCLLLER HDIATGATGR NHGLLHSGAR
YAVTDAESAR ECIEENQILR RIARHCIEPT DGLFLTLPQD DLDYQTRFIA ACQRAGIRAQ
AIDPQEALRL EPAANPALIG AVRVPDGTVD PFRLTAANMI DACEHGAEVL TYHEVIGLIR
QGDRVVGVRV FDHKRQLANE IYAQVVVNAG GIWGQRIAEY ADLNVRMFPA KGALLILGHR
INNRVINRCR PPADADILVP GDTISLIGTT STRIDYDQID NMTVTPAEVD TLIREGSLLA
PQLAQTRILR AYAGVRPLVA NDNDPSGRSV SRGIVLLDHA SRDGLEGFVT ITGGKLMTYR
LMAEWVTDKV CEKLGHQVAC TTASRPLPGS EVADPDTPQA ASPLSAPLRG SAIYRHGHRA
VALVSGQRVD SSLVCECEAV TAGEVRYAVE SLQVNNLTDL RRRTRVGMGT CQGELCACRA
AGLLCRLGQS TPQQAVSQLS QFLNERWKGM RPIAWGNTLR ESEFTSWIYQ GLCGLTERPE
QEGGDAL
|
|---|
| |