| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0109 |
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| Symbol | |
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| ID | 8117060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 127884 |
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| End bp | 128735 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644850490 |
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| Product | MIP family channel protein |
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| Protein accession | YP_003002481 |
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| Protein GI | 251787760 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
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| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.205749 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCAAT CTGAACTTTC TACCCTTAAA GGCCAGTGCG TCGCCGAGTT TCTCGGTACC
GGCCTGTTGA TTTTCTTTGG CGTTGGCTGT GTCGCGGCTC TGAAACTGGC CGGCGCCAGT
CTGGGGCTGT GGGAAATAAG TATTATCTGG GGGTTGGGCG TCGCGATGGC GATCTACCTG
ACCGCCGCGA TTTCCGGCGC CCATCTCAAT CCGGCGGTGA CCATTGCCCT GTGGCTGTTT
GCCTGTTTCG ATGGCCGCAA AGTGCTGCCT TATATCGTTT CACAGGTCGC CGGCGCATTC
TGCTCGGCGG CACTGGTTTA CGGCCTCTAC CACAACCTGT TCGACAATAT CGAACAGACG
CACAATATGG TGCGCGGCAG CGTGGAAAGC CTCGACCTGG CCGGCGTCTT CTCCACTTAT
CCTAACCCGC ACATTTCGGT GATGCAGGCG TTTCTGGTGG AAACCGTTAT CACCGCTATC
CTAATGTGTC TGATTCTGGC GCTGACCGAC GACGGCAACG GCATTCCGCG CGGACCGCTG
GCACCGCTGT TGATAGGGAT TCTGATCGCG GTTATTGGCG CGTCCATGGG GCCGTTGACC
GGGTTTGCCA TGAATCCGGC GCGTGATGCC GGTCCGAAGC TGTTTGCTTA CCTCGCCGGC
TGGGGCAAGA TCGCACTGAC CGGCGGGCGT GACATCCCTT ATATACTGAT ACCGATTTTC
GGCCCGATCG TCGGTGCCTG TCTGGGTGCA TTTGGTTATC GCAGCCTGAT TGGCCGCAAT
TTGCCTTGCG ATGTCTGCGC CATTGATGCA GATACCGATA CCACAACCTC AGCCCAAACC
CGTAAGGTCT AA
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| Protein sequence | MSQSELSTLK GQCVAEFLGT GLLIFFGVGC VAALKLAGAS LGLWEISIIW GLGVAMAIYL
TAAISGAHLN PAVTIALWLF ACFDGRKVLP YIVSQVAGAF CSAALVYGLY HNLFDNIEQT
HNMVRGSVES LDLAGVFSTY PNPHISVMQA FLVETVITAI LMCLILALTD DGNGIPRGPL
APLLIGILIA VIGASMGPLT GFAMNPARDA GPKLFAYLAG WGKIALTGGR DIPYILIPIF
GPIVGACLGA FGYRSLIGRN LPCDVCAIDA DTDTTTSAQT RKV
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