Gene B21_04178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagB21_04178 
SymbolhsdS 
ID8114996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli BL21 
KingdomBacteria 
Replicon accessionNC_012892 
Strand- 
Start bp4484467 
End bp4485177 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content41% 
IMG OID644850319 
Producthypothetical protein 
Protein accessionYP_003001892 
Protein GI251787588 
COG category[V] Defense mechanisms 
COG ID[COG0732] Restriction endonuclease S subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.695524 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATTTTGAATA ACATTATCAA TACACAAAGA CCATTATGTT ATGGTGTGGT GCAACCTGGA 
GATGATATAA AAGACGGTAT AGAATTAATT CGTGTTTGTG ATATTAACGA TGGTGAAGTA 
GATTTAAATC ATCTTCGTAA AATTTCAAAG GAAATAGATT TACAATATAA GCGTTCCAAA 
GTACGAAAGA ATGACATTCT TGTAACAATT GTTGGGGCTA TAGGTAGAAT AGGTATTGTT 
AGAGAAGATA TAAATGTTAA TATCGCTCGT GCCGTTGCCA GAATATCTCC TGAATATAAG 
ATTATTGTTC CTATGTTTCT CCATATATGG TTAAGTTCAC CAGTTATGCA AACATGGCTA 
GTTCAGTCAT CTAAGGAGGT CGCCAGAAAG ACATTAAATT TAAAAGATCT TAAAAATGCA 
TTTGTCCCTT TACCGTCTAT AGAAGAACAA CACGAAATCG TTCGCCGCGT CGAGCAACTC 
TTCGCCTACG CCGACTCCAT AGAAAAACAG GTCAACAACG CCTTAGCCCG CGTCAACAAC 
CTGACGCAAT CCATCCTGGC AAAAGCGTTC CGTGGTGAAC TCACCGCCCA GTGGCGGGCC 
GAAAACCCGG ATTTAATCAG CGGAGAAAAC AGCGCCGCTG CGTTGCTGGA GAAAATCAAA 
GCTGAGCGCG CAGCCAGCGG GGGTAAAAAA GCCTCGCGTA AAAAGTTCTG A
 
Protein sequence
MLNNIINTQR PLCYGVVQPG DDIKDGIELI RVCDINDGEV DLNHLRKISK EIDLQYKRSK 
VRKNDILVTI VGAIGRIGIV REDINVNIAR AVARISPEYK IIVPMFLHIW LSSPVMQTWL 
VQSSKEVARK TLNLKDLKNA FVPLPSIEEQ HEIVRRVEQL FAYADSIEKQ VNNALARVNN 
LTQSILAKAF RGELTAQWRA ENPDLISGEN SAAALLEKIK AERAASGGKK ASRKKF