Gene Dd703_3820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3820 
Symbol 
ID8087205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp4435590 
End bp4436486 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content61% 
IMG OID644837911 
ProductBaseplate J family protein 
Protein accessionYP_002989395 
Protein GI242241214 
COG category[R] General function prediction only 
COG ID[COG3948] Phage-related baseplate assembly protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACGG TTGATTTATC ACAGCTCCCC CAGCCGCAAA TCATTGAAGA GCTGGACTTC 
GAAGTCATCT TTCAGGATGT GAAAGCGGTG ATGATTGCTG CCTTTCCTGC CGATCAACAG
GCATCCGTAA CCGCCGCGTT GGAACTGGAG TCCGAACCGT TAACCGTGAT AGCGCAGGTG
ATCGCCTATC GGGAAATGAT GTTACGCCAG CGGATTAACG AGGGCGCCGA AGCCTGCCTA
CTCAGCTACG CCGTATCATC CGATCTGGAT AATCTGGCGG CTAACCTGAA CACGGCCCGG
CTGACCATTA CAGAGGAAAC CGACACCGCC GACGCGATAA TGGAAAGCGA CAGCGCGCTA
CGGTTGCGGG CGCAGGCGGC CTTTGAGGGG TTGAGCGTGG CCGGGCCGAC CGGCGCGTAT
GAGTATTTCG CCAAAAGTGC CAGCGGCAAG GTGGCGGATG CCAAAGCGAT CAGCCCGTCC
CCAGCGGTGG TAGTGGTGTC GGTGTTATCC ACAGAGGGAG ACGGCAGTGC CTCGGCTGAT
CTGCTGGCAA CCGTTGATGC CGCCCTGTCC GCCGACGATA AACGCCCGGT CGGCGACCGC
CTGACGGTGC AAAGCGCCGA GATTGTGCGC TATGCCATTA CGGCGGTGTT GTACCGCTAT
CCTGGGCCGG AATCGGAACC GATCCAACAG GCCGCGCAGC AGGCATTAAC GTCATGGCTT
GGCGTACAGG GGCGCATCGG GCGTGATGTG GCTCGCTCGG CCATCATGGC GGCGCTGCAT
GTGCAGGGAG TGCAACGTGT CGAGCTGCTG GAACCGGCGC AAGACATGGT GATCAGCGAC
ACGCAGGCGG CGTACTGCAC CGGATTGACT CTCACTGAGG GCGGCAGCGA TGAGTAA
 
Protein sequence
MATVDLSQLP QPQIIEELDF EVIFQDVKAV MIAAFPADQQ ASVTAALELE SEPLTVIAQV 
IAYREMMLRQ RINEGAEACL LSYAVSSDLD NLAANLNTAR LTITEETDTA DAIMESDSAL
RLRAQAAFEG LSVAGPTGAY EYFAKSASGK VADAKAISPS PAVVVVSVLS TEGDGSASAD
LLATVDAALS ADDKRPVGDR LTVQSAEIVR YAITAVLYRY PGPESEPIQQ AAQQALTSWL
GVQGRIGRDV ARSAIMAALH VQGVQRVELL EPAQDMVISD TQAAYCTGLT LTEGGSDE