Gene Dd703_3515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3515 
Symbol 
ID8089470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp4088251 
End bp4089078 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content59% 
IMG OID644837592 
Productextracellular solute-binding protein family 3 
Protein accessionYP_002989096 
Protein GI242240915 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.821579 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TAATGCTGTC CGCTTTAATC ACCGGCGCTC TGCTGGGCTC CGCCGCGCAT 
GCCGCCATCA CGCTGCCCGA CAGCATCAAA AGCAAGGGCG AGCTGACGGT CGCCATCATG
CCGAACTATC CGCCGATGGA ATTCAAGGAT CCGGCCACCA ACCAGTTGAT GGGGGTGGAT
TACGATCTGG GTATGGAAAT GGCGAAAAAG CTGGGCGTCA AAATCAACTG GCAGGAGATC
GGTTTCGAAC AGATGATCAA CGCCGTCGCC ACCAAACGTG TCGATATGAT CATGTCCGGT
ATGACGGATA CCCAGGAACG CCAGAAAGTG GTGAGCTTTG TTGACTACTT CTCCACCGGC
CCGCAGTTTT ACACCACCAC CTCCCGCAGC GACATCAAAG AGCTGACTGA CCTGTGCGGC
AAGCGCGTTG GTTCCAGCCG TCGCACGACG TTCCCGGCGG AAATCGCCGC CTGGAGCAAG
GCCAACTGTG AAGCGGCGGG CAAACCGGCA ATCGACGTGG TCGGCGCCGA AGGTACCGCC
GACGCGCGCG CCCAACTGCG TCAGCGTCGT CTGGACGGCG CGGTGCAGGG CAGCGAAACC
CTGCCGTACA TCATGAATCT GGAAAAAGAC ACCTACAAAC CGCTGGGCAA AGCCTTCTCT
TTCCAACTGA CCGGCATCGG CATCGACAAT AAGGATCCGG TACTGGTAGC CGCAGTGCAG
GCGGCCTTCA ACGCGATGAT CGCCGACGGC AGCTATCAGG CCATCCTCAG CAAATGGGGC
TTGCAGGACG GTGCGCTGAA ACAGGCAACC ATCAACCAGG GCCGTTAA
 
Protein sequence
MKKIMLSALI TGALLGSAAH AAITLPDSIK SKGELTVAIM PNYPPMEFKD PATNQLMGVD 
YDLGMEMAKK LGVKINWQEI GFEQMINAVA TKRVDMIMSG MTDTQERQKV VSFVDYFSTG
PQFYTTTSRS DIKELTDLCG KRVGSSRRTT FPAEIAAWSK ANCEAAGKPA IDVVGAEGTA
DARAQLRQRR LDGAVQGSET LPYIMNLEKD TYKPLGKAFS FQLTGIGIDN KDPVLVAAVQ
AAFNAMIADG SYQAILSKWG LQDGALKQAT INQGR