Gene Dd703_3514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3514 
Symbol 
ID8089469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp4087377 
End bp4088225 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content63% 
IMG OID644837591 
Productpolysaccharide deacetylase 
Protein accessionYP_002989095 
Protein GI242240914 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.345216 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTCTC TGACGCAGCG TCCGCGCTGG CCGGACAATA AACGAGGTTG TATGGCGCTG 
GCTTTCGATC TCGACGGGCC GACCGGCGAC GCCATGCTGA ACGGGTCTAT CTGGCAAAAG
CCGGAGTATT TTACTTTTGG CGGTTACGGG CCGTTTCGCG CCTTGGGGCG GATCCTGGCG
CTGTTGGAGC AGTTCTCGGT TCCGGCGACT TTTTTCGTGC CTGCCTGGGT GGTGGAGAAC
TGGCCGAAGC AGTGCGCCGC CATCGTCGAG CAAGGACATG AGGTGGCCTA TCACGGCTAC
CGCCATGAGT CTTTCTATGC ACTCTCTGCC GATGAGCAGC GCCGGGTGAT GGACGTCTCT
GCGGACATTT TCTGGCGCTA TCTCGGGATC CGCGCCGAGG GGTTTCGCAC GCCGTCGGGG
GACTGGCACG CCGATACGCC GGCGGTGCTG GTGGACTGCG GCGTGACCTA TTCCAGCAGT
ATGCGCGGCG ACGATCGCCC ATACCTGATC CCGGTGGCCG GCCGCGACCG CGCGCTGGTG
GAGATCCCCG GGCGTTGGGA GATGGACGAC TATGCTTCGC TGGCCTATAC CCGTTCGCCC
AACTTTCCCG CCGGACTGGA TCGCACCGCC AGCTATACGC TGACGCTGGA TAACTGGTGC
CGCGAGTACG ACGGCGCAAT GGACGAAGGA TTGTGCCTGA CCACGCTGTT TCATCCGAAA
ATTTCCGGCA AGCCGGGGCG CATCCTGCTG CTGGAACAAT TTCTTGCCCA TCTGCGCCAG
CGTGACGACG TGTGGTTCGC CCGCTGCCGC GAGGTGGCCC ACTGGCATCT CCGGGAGGAT
CGCCCATGA
 
Protein sequence
MESLTQRPRW PDNKRGCMAL AFDLDGPTGD AMLNGSIWQK PEYFTFGGYG PFRALGRILA 
LLEQFSVPAT FFVPAWVVEN WPKQCAAIVE QGHEVAYHGY RHESFYALSA DEQRRVMDVS
ADIFWRYLGI RAEGFRTPSG DWHADTPAVL VDCGVTYSSS MRGDDRPYLI PVAGRDRALV
EIPGRWEMDD YASLAYTRSP NFPAGLDRTA SYTLTLDNWC REYDGAMDEG LCLTTLFHPK
ISGKPGRILL LEQFLAHLRQ RDDVWFARCR EVAHWHLRED RP