Gene Dd703_3484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3484 
Symbol 
ID8089439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp4055560 
End bp4056405 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content58% 
IMG OID644837562 
Producttranscriptional activator RhaS 
Protein accessionYP_002989066 
Protein GI242240885 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGATAC TTCATGGCGA TGAGTTTTTT GTTTCGCAGG CGACGACGGT GGCGGTGGAA 
CCTCGTATGC CCCAGAGCGC ATTTCCGGAG CATTACCACG ATTTTTGGGA GATTGTGGTG
GTGGATCAGG GCGCCGGGGT GCACGTATTC AACGATCAAC CCTATGTGTT GTGCAGCGGC
GCGGTGTTTT TCGTGCGCGA CAACGACCGT CACCTGTTCG AGCAGGTCGA GGAACTGCAC
CTGACCAACG TGCTGTATCG CTCGCCGCGC GGCTTTCGCT TTCTGTCCGA CATCGCGCCG
TTTCTGCCTT ACGGCCCGAA CGGCGAATGG CTGGGGCAAT GGCAGGTCAA CAACGGAACC
CGGCAGCAGG TAAAACAGCT GATTCTGCAA CTGGCCGGGC AGGCCCGCAG CGAGCGTCCG
GAGGACATCG CTACCAGTGA AAGCCTGTTC CTGCAGATTC TGGTGCTGTT GCGGCAAAAA
GGATTCCGTA CCCAGAGCGA CGGCAGCGCA GCGCAGGGGA TTCAGGCGTT GTTGGGCTGG
TTGCAGAATA ATTTCTGCGA GGAAGTGAAC TGGGATGCGT TGGCGGAGCG TTTTTCGCTG
TCGTTGCGCA CGATGCATCG GCAGCTCAAG CAGCACACCG GTATGACGCC GCAGCGTTAT
TTGAACCGTC TGCGTTTGCT GGAGGCCCGC CGTCGTTTGC AGCAGAGCGA CGATTCCATC
ACCACCATCG CCCATGATTG CGGCTTTAGC GACAGCAACC ATTTTTCGAC GCAGTTTCGC
AAGGCGTTCT CGTTGGCACC CAAATCGCTG CGTCATCGGG CGCAGCATGA GGAAACCATC
CAGTAG
 
Protein sequence
MTILHGDEFF VSQATTVAVE PRMPQSAFPE HYHDFWEIVV VDQGAGVHVF NDQPYVLCSG 
AVFFVRDNDR HLFEQVEELH LTNVLYRSPR GFRFLSDIAP FLPYGPNGEW LGQWQVNNGT
RQQVKQLILQ LAGQARSERP EDIATSESLF LQILVLLRQK GFRTQSDGSA AQGIQALLGW
LQNNFCEEVN WDALAERFSL SLRTMHRQLK QHTGMTPQRY LNRLRLLEAR RRLQQSDDSI
TTIAHDCGFS DSNHFSTQFR KAFSLAPKSL RHRAQHEETI Q