Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_3484 |
Symbol | |
ID | 8089439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | - |
Start bp | 4055560 |
End bp | 4056405 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644837562 |
Product | transcriptional activator RhaS |
Protein accession | YP_002989066 |
Protein GI | 242240885 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGATAC TTCATGGCGA TGAGTTTTTT GTTTCGCAGG CGACGACGGT GGCGGTGGAA CCTCGTATGC CCCAGAGCGC ATTTCCGGAG CATTACCACG ATTTTTGGGA GATTGTGGTG GTGGATCAGG GCGCCGGGGT GCACGTATTC AACGATCAAC CCTATGTGTT GTGCAGCGGC GCGGTGTTTT TCGTGCGCGA CAACGACCGT CACCTGTTCG AGCAGGTCGA GGAACTGCAC CTGACCAACG TGCTGTATCG CTCGCCGCGC GGCTTTCGCT TTCTGTCCGA CATCGCGCCG TTTCTGCCTT ACGGCCCGAA CGGCGAATGG CTGGGGCAAT GGCAGGTCAA CAACGGAACC CGGCAGCAGG TAAAACAGCT GATTCTGCAA CTGGCCGGGC AGGCCCGCAG CGAGCGTCCG GAGGACATCG CTACCAGTGA AAGCCTGTTC CTGCAGATTC TGGTGCTGTT GCGGCAAAAA GGATTCCGTA CCCAGAGCGA CGGCAGCGCA GCGCAGGGGA TTCAGGCGTT GTTGGGCTGG TTGCAGAATA ATTTCTGCGA GGAAGTGAAC TGGGATGCGT TGGCGGAGCG TTTTTCGCTG TCGTTGCGCA CGATGCATCG GCAGCTCAAG CAGCACACCG GTATGACGCC GCAGCGTTAT TTGAACCGTC TGCGTTTGCT GGAGGCCCGC CGTCGTTTGC AGCAGAGCGA CGATTCCATC ACCACCATCG CCCATGATTG CGGCTTTAGC GACAGCAACC ATTTTTCGAC GCAGTTTCGC AAGGCGTTCT CGTTGGCACC CAAATCGCTG CGTCATCGGG CGCAGCATGA GGAAACCATC CAGTAG
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Protein sequence | MTILHGDEFF VSQATTVAVE PRMPQSAFPE HYHDFWEIVV VDQGAGVHVF NDQPYVLCSG AVFFVRDNDR HLFEQVEELH LTNVLYRSPR GFRFLSDIAP FLPYGPNGEW LGQWQVNNGT RQQVKQLILQ LAGQARSERP EDIATSESLF LQILVLLRQK GFRTQSDGSA AQGIQALLGW LQNNFCEEVN WDALAERFSL SLRTMHRQLK QHTGMTPQRY LNRLRLLEAR RRLQQSDDSI TTIAHDCGFS DSNHFSTQFR KAFSLAPKSL RHRAQHEETI Q
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