Gene Dd703_3482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3482 
Symbol 
ID8089437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp4052932 
End bp4054623 
Gene Length1692 bp 
Protein Length563 aa 
Translation table11 
GC content64% 
IMG OID644837560 
ProductABC transporter related 
Protein accessionYP_002989064 
Protein GI242240883 
COG category[R] General function prediction only 
COG ID[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase 
TIGRFAM ID[TIGR02323] phosphonate C-P lyase system protein PhnK 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAAA CGACAACGAC AACAACGACA ACACCGCCGC CGCTACTGCG GGTCGCAAAC 
CTGAACGTGA CGTTCCCCAG CCCGACCGGG CCGGTGGAAT CGGTACGCAA TCTGTCGTTC
CAGGTGAATC CCGGCGAAAT ACTGGCGCTG GTCGGTGAAT CCGGTTCCGG CAAATCGGTG
ACGGCCCGGA CGCTGGTCGG ACTGGCGGGC GAGCATGCGC AAGTGACGGC AGACGCCATC
AAGTTGACGC GCCACGACGG TAGTCTCTGT GATTTACCAA CGCTCGGCGA TCGGCAATGG
CGCCACATCC GCGGCCGGGA AATCGGCTTT GTTCTACAGG ATGCGCTGGT CTCGCTCGAT
CCGCTGCGCA AAATCGGTCA AGAAGTGGCG GAGCCGCTGC TGACGCATAA ATTGCTGCCG
CGCGCCGAGG TACCGGCCCG CGTGGCGGAA CTGCTCCAGC AAGCCGGTAT TCCCGATCCG
CACATCCGCG CTGCGCAATA CCCGCACGAA CTCTCCGGTG GACTGCGCCA GCGAGCGCTG
ATCGCCACCG CGCTGGCGGG CGGCCCTAAA CTACTGATCG CCGATGAGCC CACCACCGCG
CTGGATGCCA CCGTTTCACA GCAGGTGCTA AAGCTGTTTA CTGCACTGGC GCAGGCCGGC
CACGGCGTGT TGTTGATTAC CCACGATCTG GCCGTGGTAG CCCAAATCGC CGATCGCGTG
ATGGTGATGC AAAAAGGCGC CCTGGTGGAA AGTGGCCCGA CGCGCCAGAT CCTGACATCG
CCGCAGCATC CCTACACCCA TCGTCTGCTG GCGGCGATCC CGACCGCCGC TACGCGCGGG
AACTGGCTGG CGGGCGAGAA CCCGCTGAGC CAGCACGCCG CCGCGCTGCT CTCGTCGTTA
TCGGAACAGA CCGAACGCCC CGGGCAGGCG CTGCGGGTGG ATGGCGTATC GGTCAGCTTC
AAACGGCCGG ACGGCAGCCG GATGACGGCG GTCAACCGGC TCTCGCTCGT GCTGGAACGG
GGTGAAACAC TGGGCATCGT CGGCGAATCC GGCTCCGGCA AAACCACGTT GGGCAAAGTC
ATTCTGGCGC TACAACCGCC GGACGACGGC GAAGTCCTGC TCGGCGAATG CCCCTGGAGC
GCGCTGCCCG AGCGGGAACG CCGCCCGCTG CGCGCCCGGA TCCAAACCAT TACGCAAGAT
CCGCTCAGTT CATTCGACCC GCAATTCACT GTCGAACACA TTCTGCTGCA ACCCTTGCGG
CTGCGACGCG ACCTTTCGCC GGAAGCCCGC CGGCAACGCA TTCTGGCGCT GCTGGAACTG
GTGGGATTAT CGCCGACGCT GCTTTCCCGT CGGCCACGTT CGCTGTCCGG CGGCCAGCGT
CAGCGTATTT CCATCGCGCA GGCGCTGGCG GCGGAGCCGG AGGTGCTGAT CTGCGACGAG
CCGGTGTCGG CGCTGGATGT CACCACACAG GCACAAGTGC TGGATTTGCT GGTGGCGCTG
CAACAGAGAC TCAGGTTGTC GATGGTTTTC ATCTCCCACG ATTTGGGCGT CGTGCAACAT
ATGAGCCATC GCATTCTGGT GATGAAAAGC GGCGAAGTGG TGGAACGCGG CACGGTCGAA
CAGATTTTCA CTCAGCCCCA GCATCCCTAC ACCCGCCAAT TGCTGTCAAC GGTTGCCGAT
ATCCACATCT GA
 
Protein sequence
MSQTTTTTTT TPPPLLRVAN LNVTFPSPTG PVESVRNLSF QVNPGEILAL VGESGSGKSV 
TARTLVGLAG EHAQVTADAI KLTRHDGSLC DLPTLGDRQW RHIRGREIGF VLQDALVSLD
PLRKIGQEVA EPLLTHKLLP RAEVPARVAE LLQQAGIPDP HIRAAQYPHE LSGGLRQRAL
IATALAGGPK LLIADEPTTA LDATVSQQVL KLFTALAQAG HGVLLITHDL AVVAQIADRV
MVMQKGALVE SGPTRQILTS PQHPYTHRLL AAIPTAATRG NWLAGENPLS QHAAALLSSL
SEQTERPGQA LRVDGVSVSF KRPDGSRMTA VNRLSLVLER GETLGIVGES GSGKTTLGKV
ILALQPPDDG EVLLGECPWS ALPERERRPL RARIQTITQD PLSSFDPQFT VEHILLQPLR
LRRDLSPEAR RQRILALLEL VGLSPTLLSR RPRSLSGGQR QRISIAQALA AEPEVLICDE
PVSALDVTTQ AQVLDLLVAL QQRLRLSMVF ISHDLGVVQH MSHRILVMKS GEVVERGTVE
QIFTQPQHPY TRQLLSTVAD IHI