Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_3459 |
Symbol | |
ID | 8089413 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | - |
Start bp | 4030218 |
End bp | 4030961 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644837537 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002989041 |
Protein GI | 242240860 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3967] Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATGA CAGGGAATAC CCTGCTGATT ACCGGCGGTG GTTCCGGGAT CGGCGCCGGG TTGGCGGCGG CGTTTCATGC CTGCGGCAAT CAGGTGATTA TCGCCGGGCG TAGTGAAGCA CGCTTGAAAC GGGTAACGGC TGCGCATCCC GGCATGGCGT ACCGGCTGCT GGATCAACGC GATGCGGAAA CGATACCGAT GTTCGCCCGC AGTCTGACGG CGGATTACCC GCGGCTGAAT GTGCTGATTA ATAATGCCGG CATCCAGCGG CGCGAGGATG TTGTCCGCCA GGATCGGCAA GTCGTATCGG AGACGCTGGC GACTAATCTG CAGGGGCCGA TTCTGTTGAC CGGCGCTCTG CTACCGCATC TGTTGGCGCA GCCGTCCGGT GCTATCCTGA ATGTCACCTC TGAACTGGCG TTTGTGCCGC AGGCGATCAC GCCCACCTAT TGCGCGAGCA AAGCCGCATT GCATGCATAT AGCGAGGCGC TGCGTTGCCA GTTGCAGGGC CGCGCGCTGC AAGTGATCGA AATTATTCCG CCCTGGGTAC AAACCGGGTT GCAAGGCGAA TGGGGGTTCG ATTCCAATGC AATGCCGTTG CAGGCATTTA TTGATGAAAC CTTTTCATTA CTATCACAAC ATCCCGACGC GGAAGAGATT GTGGTGTCTC GGGCGCGGGC GTTTCGCCTT GCCGAGCGTA ACGGTCAATA TCATCAGTTA TTCCATGAGT TTAATCGTAA ATAG
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Protein sequence | MNMTGNTLLI TGGGSGIGAG LAAAFHACGN QVIIAGRSEA RLKRVTAAHP GMAYRLLDQR DAETIPMFAR SLTADYPRLN VLINNAGIQR REDVVRQDRQ VVSETLATNL QGPILLTGAL LPHLLAQPSG AILNVTSELA FVPQAITPTY CASKAALHAY SEALRCQLQG RALQVIEIIP PWVQTGLQGE WGFDSNAMPL QAFIDETFSL LSQHPDAEEI VVSRARAFRL AERNGQYHQL FHEFNRK
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