Gene Dd703_3459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3459 
Symbol 
ID8089413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp4030218 
End bp4030961 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content57% 
IMG OID644837537 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_002989041 
Protein GI242240860 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3967] Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATGA CAGGGAATAC CCTGCTGATT ACCGGCGGTG GTTCCGGGAT CGGCGCCGGG 
TTGGCGGCGG CGTTTCATGC CTGCGGCAAT CAGGTGATTA TCGCCGGGCG TAGTGAAGCA
CGCTTGAAAC GGGTAACGGC TGCGCATCCC GGCATGGCGT ACCGGCTGCT GGATCAACGC
GATGCGGAAA CGATACCGAT GTTCGCCCGC AGTCTGACGG CGGATTACCC GCGGCTGAAT
GTGCTGATTA ATAATGCCGG CATCCAGCGG CGCGAGGATG TTGTCCGCCA GGATCGGCAA
GTCGTATCGG AGACGCTGGC GACTAATCTG CAGGGGCCGA TTCTGTTGAC CGGCGCTCTG
CTACCGCATC TGTTGGCGCA GCCGTCCGGT GCTATCCTGA ATGTCACCTC TGAACTGGCG
TTTGTGCCGC AGGCGATCAC GCCCACCTAT TGCGCGAGCA AAGCCGCATT GCATGCATAT
AGCGAGGCGC TGCGTTGCCA GTTGCAGGGC CGCGCGCTGC AAGTGATCGA AATTATTCCG
CCCTGGGTAC AAACCGGGTT GCAAGGCGAA TGGGGGTTCG ATTCCAATGC AATGCCGTTG
CAGGCATTTA TTGATGAAAC CTTTTCATTA CTATCACAAC ATCCCGACGC GGAAGAGATT
GTGGTGTCTC GGGCGCGGGC GTTTCGCCTT GCCGAGCGTA ACGGTCAATA TCATCAGTTA
TTCCATGAGT TTAATCGTAA ATAG
 
Protein sequence
MNMTGNTLLI TGGGSGIGAG LAAAFHACGN QVIIAGRSEA RLKRVTAAHP GMAYRLLDQR 
DAETIPMFAR SLTADYPRLN VLINNAGIQR REDVVRQDRQ VVSETLATNL QGPILLTGAL
LPHLLAQPSG AILNVTSELA FVPQAITPTY CASKAALHAY SEALRCQLQG RALQVIEIIP
PWVQTGLQGE WGFDSNAMPL QAFIDETFSL LSQHPDAEEI VVSRARAFRL AERNGQYHQL
FHEFNRK