Gene Dd703_3456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3456 
Symbol 
ID8089410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp4025242 
End bp4026408 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content62% 
IMG OID644837534 
Productamidohydrolase 
Protein accessionYP_002989038 
Protein GI242240857 
COG category[R] General function prediction only 
COG ID[COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase 
TIGRFAM ID[TIGR01891] amidohydrolase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGCTA TCCCTCTCGA TATTATTCAG CAGGCGGTTG CCTGGCGTCG CGATTTTCAT 
GCTCATCCGG AAATAGGTTT GCGCGAACGC CGAACGTCCG GCCGGATTGC CGAATTGCTG
AAATCTTTTG GGCTTGAGGT GTATTCCGGC ATTGCGCAAA CCGGCGTGGT GGGCACGCTA
CGTCATGGCG ACGGCCCGGC TATCGGCCTG CGTGCCGATA TCGACGCGCT GCCGGTTCAA
GAGCAAAACG GGTTCGATCA TCGTTCCCGC GTTGAAGGGT GCATGCATGC CTGCGGTCAT
GACGGACATA CCGCCATTCT GTTGGCGACC GCCCGTTATC TGAGTGAAAC CCGCCGCTTT
TCCGGTACCG TGCATTTTGT GTTTCAGCCT GCCGAGGAGA ACGCAGGCGG CGGTCAGATG
ATGGTGAACG AAGGCTTGTT TGAGCGTTTC CCGATGCAGG CGATCTATGC GTTGCATAAC
TGGCCGGGGC TGGCGGCGGG CGATGTGCTG GTGAATCCCG GCGCGATGAT GGCCTCGCAG
GATGGATTCC GCATTACGCT GACGGGCCGC AGCAGCCACG CAGCGATGCC TGAACGTGGT
GCGGATCCGG TGGTGGCCGC CGCCCAGTTG ATCCTGGCGT TGCAAACCAT CACGTCGCGT
CGGCTGTCGC CGCAGGAGCA GGCGGTGATC AGCATTACCC GCATCGAGGG CGGCGAGGCG
TTGAATGTGA TCCCGGAACA GGTGGCGCTG GCGGGCACCT TGCGTTGTCT CAGTGATGAA
ACCCGGTCAA CGGCTCGGCG GCTGATCGAT GAATATGCGG CATCGGTGCC TTTGCCCTTT
GGGGTTCGGG GCGAAGTGCG CTGGCGCTAC GGTTATCCGG TGACTCGCAA CCAGCCTGAA
ACCGCCTCCG CGTTACGGGA TGCGGCGGTG TCCGCGCTGG GCGCGGCGCG CGTGCATTGG
GATCGGCCTG CATCGCTGGC CGCCGAAGAT TTTTCCTACA TGCTGCAGGC GTGTCCCGGC
GCCTATTTCT GGCTGGGCGC CGATAGCACA TCACCTTGTG CGCCGTTGCA CAACGGCGGT
TATGACTTCA ACGACGACAT TATCGGCGAC GGCATTCGGG TGTGGGTAGC GCTGGTGGAA
CGCTCATTGG GCGCGGCGAA TGCATGA
 
Protein sequence
MAAIPLDIIQ QAVAWRRDFH AHPEIGLRER RTSGRIAELL KSFGLEVYSG IAQTGVVGTL 
RHGDGPAIGL RADIDALPVQ EQNGFDHRSR VEGCMHACGH DGHTAILLAT ARYLSETRRF
SGTVHFVFQP AEENAGGGQM MVNEGLFERF PMQAIYALHN WPGLAAGDVL VNPGAMMASQ
DGFRITLTGR SSHAAMPERG ADPVVAAAQL ILALQTITSR RLSPQEQAVI SITRIEGGEA
LNVIPEQVAL AGTLRCLSDE TRSTARRLID EYAASVPLPF GVRGEVRWRY GYPVTRNQPE
TASALRDAAV SALGAARVHW DRPASLAAED FSYMLQACPG AYFWLGADST SPCAPLHNGG
YDFNDDIIGD GIRVWVALVE RSLGAANA